Gene Tneu_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0890 
Symbol 
ID6164345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp790995 
End bp792074 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content64% 
IMG OID641668046 
Productnucleotidyl transferase 
Protein accessionYP_001794273 
Protein GI171185354 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGT GCGGGATCAT ACTGGCGGGG GGCTTCGCCA CGAGGCTGAG GCCCCTCAGC 
TACACCAAGC CCAAGCCCCT CTTCCCCATC TTAGGCAAGC CCGTCTTAGA CTGGGTGATC
GAGAAGGTGG CCGAGGTAGC GGAGCCCGTG GTGTCGGCGA GGTACCTTTC CTACGTCATC
AGAAGCCACA TAAACGCCAG GTGGGGCCAG AGGGTGAGGG TTGTGGAGGA GGATAGGCCG
TTGGGCGACG GCGGCGCCGT TATAAACGCG GTTAGGAGCC TGGGCGTGAG GGGGCCCATA
GTGGTGGCCA ACGGCGACGT CTTCACAGAC CTTTCGGTGA AGAGGCTGTG GGAGTTCCAC
AGGAGAGCCG GTGCGGCGGT CACCATAGCC CTCATCGAGG TGCCGCAGGA GGAGGTGGGC
AGGTTCGGCA TCGCCGTTTT AGACGAGGGG GGCCGCATCA GGAGGTTCGT GGAAAAGCCC
AGGGAGCCGG TGGGGAGCAA CTTGGCCAAC GCCGGCTTCT ACATCTTCGA GCCGGAGGCC
GTCAGGGAGT TCCCCGAGCT CAACTCGGGG GAGGTCAAGA TCGCCAAGCA CATAATCCCG
AGGCTGATGG AGAAGTTCGA CATCTACGGC TACGTCCACA GAGGGCTTTG GTTCGACATC
GGAACACATG CCGACTACCT GAAGGCCAAC TTCGCCGCGT TGGACCGCTG CGATGTCTGT
AGCCCCGAGG TGCCGGGGGC GAAGATAATC CCGCCTGTCT ACATCGGCGA GGGCGCCACG
GTGGGCGCCG GCAGCGTCCT CGGGCCCTAC GCTGTGGTGG GCGCGGGGGC GAAGCTGGGG
CCCCACGTAA GGGTGAGGGA AAGCGTGTTG ATGGACGGCG TTGTGGCCGA GGCGGGGGCC
TACATACACC GGTCGATCGT GGGGGAGGGG GCGGTGTTGG GCCGGTGGAC GCGCCTGGTG
GAGGCGGTGG TGGCAGACGG CGTATATGTA AAAGACGAGG TGTACGTGGG GCGGGGAGCC
GCCGTGGGGC CCAACAGGGA GGTTGAACAA GACGTGAAAG ACGGCGAAAT TCTGCCGTAG
 
Protein sequence
MAECGIILAG GFATRLRPLS YTKPKPLFPI LGKPVLDWVI EKVAEVAEPV VSARYLSYVI 
RSHINARWGQ RVRVVEEDRP LGDGGAVINA VRSLGVRGPI VVANGDVFTD LSVKRLWEFH
RRAGAAVTIA LIEVPQEEVG RFGIAVLDEG GRIRRFVEKP REPVGSNLAN AGFYIFEPEA
VREFPELNSG EVKIAKHIIP RLMEKFDIYG YVHRGLWFDI GTHADYLKAN FAALDRCDVC
SPEVPGAKII PPVYIGEGAT VGAGSVLGPY AVVGAGAKLG PHVRVRESVL MDGVVAEAGA
YIHRSIVGEG AVLGRWTRLV EAVVADGVYV KDEVYVGRGA AVGPNREVEQ DVKDGEILP