Gene Tneu_0831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0831 
SymbolleuD 
ID6164656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp747250 
End bp747738 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content60% 
IMG OID641667987 
Product3-isopropylmalate dehydratase small subunit 
Protein accessionYP_001794214 
Protein GI171185295 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR02087] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGTCA GGGGAAAGGC GATAGTGTAC GGGGATAAGA TAGATACAGA CGTGATAATT 
CCAGCTAAAT ACCTAGTATA CACCGACCCG GCTGTGCTCG GCCAACACGC CATGGAGCCC
CTTGACCCGG AGTTCCCAAA GAAGGCCAAG GGGGCGGTGT TGGTGGCAGG CCGCGCCTTC
GGAATGGGGT CGTCAAGGGA GCAGGCGGCG ATTGCCTTAA AAGGCGCCGG CGTCCTCGCC
GTGGTGGCGG AGAGCTTCGC ACGGATATTT TTCAGAAACG CGATTAACGT GGGTCTCCCA
GTCCTGCAGG TCCCCGACGT GACGAAGAGG GTGAGGGAGG GCGACGAGCT TGAGGTGGAC
ATCGAGGGAG GGTACCTACT GAATCTGACG ACGGGGGAGA GGCTGGAGGG GAAGCCTCTG
AGGGGTCTCC CACTGGCTAT TCTGAAGGCG GGCGGGCTGG TTAACTTCCT AAAGACGGCG
GGTAGATAG
 
Protein sequence
MKVRGKAIVY GDKIDTDVII PAKYLVYTDP AVLGQHAMEP LDPEFPKKAK GAVLVAGRAF 
GMGSSREQAA IALKGAGVLA VVAESFARIF FRNAINVGLP VLQVPDVTKR VREGDELEVD
IEGGYLLNLT TGERLEGKPL RGLPLAILKA GGLVNFLKTA GR