Gene Tneu_0790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0790 
Symbol 
ID6164395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp709021 
End bp709824 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content61% 
IMG OID641667948 
Producttransketolase domain-containing protein 
Protein accessionYP_001794175 
Protein GI171185256 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3959] Transketolase, N-terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.931953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGAGGA GCCGCCCCGA ACTAAACGGC CTTATCTGTA AAGCTAGGAG ATACATCGTG 
TTGATGGCCG GCTACGACCC GGGGATGCAC CTCGGCTCAT CTCTCTCCGT CGTGGAGATA
GCGGCTGCGC TGTATGGGAC AGGTCGGGTG AAGTTCAACG TGGCTAACGG CACGCGGGAT
AGGAACTACT TCGTGCTTTC TAAGGGCCAC GCGGTACATG CGATATATGC GCTGGCGGCG
GCGATGGGGT ATTTGAGCAT AGATGAGCTC AGGGAGACGG GTAGCCTCGG TAGCCGCCTC
CAGAACCACC CAGAGGTGGA CACCCCCTTC GTGGACGTGC CGAACTCCGG CTCGCTTGGG
CAGGGCATAA GCATAGCCGT GGGCCTCGCC TTGGGCCTCC GGCTGAGGGG TGAGCCGGGC
AGGGTGTACC TCGTAACCGG AGACGGCGAG CTTGACGAGG GCCAGAGCTG GGAGTCCTTC
GCCGTGGCGG CGCACTACGG CTTGAACAAC CTGGTGACGA TAGTGGATCT AAACGGCGTT
CAGCTGGATG GACACAGCGA GGAGGTGCTA CGCAAGGGGG ATCTAGCCGC TAGGTTTAGA
TCCCTCGGCT TCGAGGTGTT TGAGGTCGAC GGACACGACG TTGGGCAGAT AATCGAGGCG
CTTGAGAAGG CCGAGAGGAG CGCGAAGCCC CCCGTCATAA TAGCCAAGAC CGTCAGGGGG
AGGGGGGTTC CGCCGATAGA GGACACAGCT AAGCAGAGGC TTTCGAGAGA CGACGCCCTC
AAATACGCGG GGAACATATG CTAG
 
Protein sequence
MERSRPELNG LICKARRYIV LMAGYDPGMH LGSSLSVVEI AAALYGTGRV KFNVANGTRD 
RNYFVLSKGH AVHAIYALAA AMGYLSIDEL RETGSLGSRL QNHPEVDTPF VDVPNSGSLG
QGISIAVGLA LGLRLRGEPG RVYLVTGDGE LDEGQSWESF AVAAHYGLNN LVTIVDLNGV
QLDGHSEEVL RKGDLAARFR SLGFEVFEVD GHDVGQIIEA LEKAERSAKP PVIIAKTVRG
RGVPPIEDTA KQRLSRDDAL KYAGNIC