| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0781 |
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| Symbol | |
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| ID | 6164307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 700515 |
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| End bp | 701297 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641667939 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001794166 |
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| Protein GI | 171185247 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.015906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0869709 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACTTCG CGGTGATAGG CACACACGTG AGGGGGAAGT CGGCGAGCCC CGCCATGCAC
AACGCCTCTT TCAAAGCCCT CGGGGTCAAC GCCGTGTATA TAGCCGTCGA CGTGCCGAGG
GAGGAGCTAC CCTGCTTCCT CAAGCTCGCC AGGCTGAACC TAAGAGGCTT CAACGTCACT
ATCCCCCACA AGGAGGAGGT GGTGAAGCAC CTCGACGGCG TTGCGGCAGA CGCCAGAGCC
ATAGGCGCTG TGAACACTGT GCTTGTGGAG AGGAACCTCC TCGTCGGCTA CAACACAGAC
GCCTCGGCGG TCTACCAGCT GGCGGGCTCC CACATGAGGG GGGCAGACGT GTTGATAGTG
GGCGCAGGGG GCGCCGCGAG GGCCGCCCTC TTCGCCGCGA TCAAGGCCGA GGCCAGGGCC
GTCTACATAG CCAACAGGAC CTACGAGAGG GCCGAGGCCC TAGCCAGGGA GTTCGCCGAG
AAGTTCAAGA GGGAGGTAAA AGCCGTGAGG AGCCCCGTCA AGGCGGACGT GGTCGTAAAC
GCGACCCCCG TCTACGACGC CATGGTGGCA GACCTCAGCG GCGCCTCTCT CTACGTGGAC
TTCGCCTACA TCCCAACCCC CAGGACAAAG ATGGTGGAGG AGGCCCAGAG GCTAGGGATA
AAGGTGGTAG ACGGGGTAGA CCTACTGGTG GAGCAGGGGG CTCAAGCCGA GAAGATCTGG
CTCGGAGTAG AGCCGGACAG AACAGTTATG AAGAGGGCCG TCCTCGAGTT CCTAGGGATA
TGA
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| Protein sequence | MYFAVIGTHV RGKSASPAMH NASFKALGVN AVYIAVDVPR EELPCFLKLA RLNLRGFNVT
IPHKEEVVKH LDGVAADARA IGAVNTVLVE RNLLVGYNTD ASAVYQLAGS HMRGADVLIV
GAGGAARAAL FAAIKAEARA VYIANRTYER AEALAREFAE KFKREVKAVR SPVKADVVVN
ATPVYDAMVA DLSGASLYVD FAYIPTPRTK MVEEAQRLGI KVVDGVDLLV EQGAQAEKIW
LGVEPDRTVM KRAVLEFLGI
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