| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0748 |
|---|
| Symbol | rpl22p |
|---|
| ID | 6165103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 666649 |
|---|
| End bp | 667206 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641667902 |
|---|
| Product | 50S ribosomal protein L22P |
|---|
| Protein accession | YP_001794133 |
|---|
| Protein GI | 171185214 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0091] Ribosomal protein L22 |
|---|
| TIGRFAM ID | [TIGR01038] ribosomal protein L22(archaeal)/L17(eukaryotic/archaeal) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCTCGGC ACCAGAACTA TTCCCTCAGC GATGAGGCTG CGGTCCAGCT GGTGTTTAGG
AAGTACGGGG TGAAGGTATC GGCTGAACAG ATCGCCAAGG CCTACGCGCC GGAGCAGAAG
ATGTCTTGGA AAAAGAGCGT TGAGGTGGCC AGGTTTATAG AGGGCATGAC CCTTAGGCAA
GCCAAGTCGT GGCTTGAGGA CGTGGTTAAG ATGAAGAGGC CTATCCCCAT TAGGACCTTC
AAGAAGAAGC AGGCCCACCA CGCCACCCCC TGGAGCGGGT GGCCTGTGGC TAAGTGGCCT
GTGAAGGTGG CGAGGAGGTT CCTAGATCTG TTGGAGAATC TGGAGAACAA CGCCAGGTTC
AGAGGGTTGG ACGTCGAGAG GGTTGTCATC GTCCACGCCG CGGCCCACAA GGGCTACAGG
ATACACAACA TTATGCCGAG GGCCTTCGGC AGAGCCACCA GATTCGACGA ACAGACGGTC
AACGTCGAGG TGATCGCCGC GGAGCTACCT CAACAGGTTG TACCAAAGCG CTACAGACTG
AACCTTGTAA AGCGCTAA
|
|---|
| Protein sequence | MPRHQNYSLS DEAAVQLVFR KYGVKVSAEQ IAKAYAPEQK MSWKKSVEVA RFIEGMTLRQ
AKSWLEDVVK MKRPIPIRTF KKKQAHHATP WSGWPVAKWP VKVARRFLDL LENLENNARF
RGLDVERVVI VHAAAHKGYR IHNIMPRAFG RATRFDEQTV NVEVIAAELP QQVVPKRYRL
NLVKR
|
|---|
| |