Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_0740 |
Symbol | |
ID | 6165163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | - |
Start bp | 659495 |
End bp | 660148 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641667894 |
Product | CRISPR-associated Cas4 family protein |
Protein accession | YP_001794125 |
Protein GI | 171185206 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1468] RecB family exonuclease |
TIGRFAM ID | [TIGR00372] CRISPR-associated protein Cas4 |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.593112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCTTC TGCTTCCTAG GCCCATCTGT AGCTTGGTGA ACTGCGACGA TTTGGAGAAT TCGATTGACG CAGACAGCGC GCTGGAGGAG ATGAAAAAGG AGCAGGAGGT CTTTAGGCTA CTTCCAGACG TCTACGCATA CAGGTACGAC TTTAGGAGAA TCTCGCCCTC CGTAATCAAC GACTTCGAGT ACTGCCCTAG GCTGTTGTGG GTTCAGTATA AGCTCGGGCT TAAGCTCTTC ACGAAGAGCT CGGCCATTTC GCTGGTCCGC GGGAGGTTGC TCCACGAGAG GTATGAAAGG GCGGTCTCAG CCTTCGATAA CGTGATCACC GAGTATAAGG TAGAGGTGGG GGATCTCGTC GGCGTTATCG ACGTCGTAAT TAGGAAGGGG GGGCGTAGCA TACCTGTGGA GGTGAAGACA GGTCTTGCGT CGAAGGAGGC GCACAGGAAG CAACTGCAGA TATATATCTA CCTCCTAAAC GCCGGGTATG GATATCTTGT GTACAGAAAT AAGGTCGAGA GAGTTGAGAG AGACGATAGA GCGGTGGAGT TGCTCATGGA GATAAAAAAG GTGTTGAGCT CGGATAGACC CCCCGCGGCT AGATGCGGTA GATGTCCCTT TGAGGTGATA TGTAGAAACG TGGCTACCCG GTGA
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Protein sequence | MELLLPRPIC SLVNCDDLEN SIDADSALEE MKKEQEVFRL LPDVYAYRYD FRRISPSVIN DFEYCPRLLW VQYKLGLKLF TKSSAISLVR GRLLHERYER AVSAFDNVIT EYKVEVGDLV GVIDVVIRKG GRSIPVEVKT GLASKEAHRK QLQIYIYLLN AGYGYLVYRN KVERVERDDR AVELLMEIKK VLSSDRPPAA RCGRCPFEVI CRNVATR
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