Gene Tneu_0740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0740 
Symbol 
ID6165163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp659495 
End bp660148 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content52% 
IMG OID641667894 
ProductCRISPR-associated Cas4 family protein 
Protein accessionYP_001794125 
Protein GI171185206 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.593112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTTC TGCTTCCTAG GCCCATCTGT AGCTTGGTGA ACTGCGACGA TTTGGAGAAT 
TCGATTGACG CAGACAGCGC GCTGGAGGAG ATGAAAAAGG AGCAGGAGGT CTTTAGGCTA
CTTCCAGACG TCTACGCATA CAGGTACGAC TTTAGGAGAA TCTCGCCCTC CGTAATCAAC
GACTTCGAGT ACTGCCCTAG GCTGTTGTGG GTTCAGTATA AGCTCGGGCT TAAGCTCTTC
ACGAAGAGCT CGGCCATTTC GCTGGTCCGC GGGAGGTTGC TCCACGAGAG GTATGAAAGG
GCGGTCTCAG CCTTCGATAA CGTGATCACC GAGTATAAGG TAGAGGTGGG GGATCTCGTC
GGCGTTATCG ACGTCGTAAT TAGGAAGGGG GGGCGTAGCA TACCTGTGGA GGTGAAGACA
GGTCTTGCGT CGAAGGAGGC GCACAGGAAG CAACTGCAGA TATATATCTA CCTCCTAAAC
GCCGGGTATG GATATCTTGT GTACAGAAAT AAGGTCGAGA GAGTTGAGAG AGACGATAGA
GCGGTGGAGT TGCTCATGGA GATAAAAAAG GTGTTGAGCT CGGATAGACC CCCCGCGGCT
AGATGCGGTA GATGTCCCTT TGAGGTGATA TGTAGAAACG TGGCTACCCG GTGA
 
Protein sequence
MELLLPRPIC SLVNCDDLEN SIDADSALEE MKKEQEVFRL LPDVYAYRYD FRRISPSVIN 
DFEYCPRLLW VQYKLGLKLF TKSSAISLVR GRLLHERYER AVSAFDNVIT EYKVEVGDLV
GVIDVVIRKG GRSIPVEVKT GLASKEAHRK QLQIYIYLLN AGYGYLVYRN KVERVERDDR
AVELLMEIKK VLSSDRPPAA RCGRCPFEVI CRNVATR