Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_0726 |
Symbol | |
ID | 6165347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 646361 |
End bp | 647020 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641667879 |
Product | ERCC4 domain-containing protein |
Protein accession | YP_001794111 |
Protein GI | 171185192 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1948] ERCC4-type nuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAT TCGAGCTTGT CCCTACCGTT CTCGTAGACT CGCGCGAACA AGCTGAGGAG GTAGTACGCC ACATAAAGGA GGCCGGTTGC GCCGTTGTAA AAACTAAGCT TGAGGTGGGG GACTACGTGG CTGGCGTCTT TATCTTCGAA AGGAAAAGCG CTTCGGATTT TGTAAATTCT ATAATCGACG GCAGGCTTTT CGATCAAGCC GAAAGGCTTA AGAGTGCCGG ACTGAGGCCG GTGATAGTTG TGGAGGGTGA CCTCTGGGAG GAGCTAAAGT CGAGGAGGGT TTCCCCAAAC GCCGTCTTAG GCGCCCAGTT GGCCCTCTAC AAGATGGGGC TTGGTCTCAT ATATACGGAG GATAGGGCGC AGACGGGGGC CCTCCTCTGT CTCGCCGCCA AGAAGGAAGG TGGTGGCAAG GTGAAGGCGC CTGCCGCTAA AAAGGGAAGC GACGTCCGCG CCCTTCAGAT CGCGCTTCTG GCCTCTCTGC CCGGCATAGG GCCTAAGCGT GCTGAGGAGC TGTTGAAGAG GTTCGGCACC CCCCTCAACG CCCTCCTTAA CTACAGATCG TGGAACATAG ACGAGAGACG ACATGCCGCG ATTAAGAGGA TCCTAGAAAC TCCGTACTCC TCCGGCTCGC AACTTGACGA TTTTCTATAG
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Protein sequence | MMKFELVPTV LVDSREQAEE VVRHIKEAGC AVVKTKLEVG DYVAGVFIFE RKSASDFVNS IIDGRLFDQA ERLKSAGLRP VIVVEGDLWE ELKSRRVSPN AVLGAQLALY KMGLGLIYTE DRAQTGALLC LAAKKEGGGK VKAPAAKKGS DVRALQIALL ASLPGIGPKR AEELLKRFGT PLNALLNYRS WNIDERRHAA IKRILETPYS SGSQLDDFL
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