Gene Tneu_0726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0726 
Symbol 
ID6165347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp646361 
End bp647020 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content55% 
IMG OID641667879 
ProductERCC4 domain-containing protein 
Protein accessionYP_001794111 
Protein GI171185192 
COG category[L] Replication, recombination and repair 
COG ID[COG1948] ERCC4-type nuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAT TCGAGCTTGT CCCTACCGTT CTCGTAGACT CGCGCGAACA AGCTGAGGAG 
GTAGTACGCC ACATAAAGGA GGCCGGTTGC GCCGTTGTAA AAACTAAGCT TGAGGTGGGG
GACTACGTGG CTGGCGTCTT TATCTTCGAA AGGAAAAGCG CTTCGGATTT TGTAAATTCT
ATAATCGACG GCAGGCTTTT CGATCAAGCC GAAAGGCTTA AGAGTGCCGG ACTGAGGCCG
GTGATAGTTG TGGAGGGTGA CCTCTGGGAG GAGCTAAAGT CGAGGAGGGT TTCCCCAAAC
GCCGTCTTAG GCGCCCAGTT GGCCCTCTAC AAGATGGGGC TTGGTCTCAT ATATACGGAG
GATAGGGCGC AGACGGGGGC CCTCCTCTGT CTCGCCGCCA AGAAGGAAGG TGGTGGCAAG
GTGAAGGCGC CTGCCGCTAA AAAGGGAAGC GACGTCCGCG CCCTTCAGAT CGCGCTTCTG
GCCTCTCTGC CCGGCATAGG GCCTAAGCGT GCTGAGGAGC TGTTGAAGAG GTTCGGCACC
CCCCTCAACG CCCTCCTTAA CTACAGATCG TGGAACATAG ACGAGAGACG ACATGCCGCG
ATTAAGAGGA TCCTAGAAAC TCCGTACTCC TCCGGCTCGC AACTTGACGA TTTTCTATAG
 
Protein sequence
MMKFELVPTV LVDSREQAEE VVRHIKEAGC AVVKTKLEVG DYVAGVFIFE RKSASDFVNS 
IIDGRLFDQA ERLKSAGLRP VIVVEGDLWE ELKSRRVSPN AVLGAQLALY KMGLGLIYTE
DRAQTGALLC LAAKKEGGGK VKAPAAKKGS DVRALQIALL ASLPGIGPKR AEELLKRFGT
PLNALLNYRS WNIDERRHAA IKRILETPYS SGSQLDDFL