Gene Tneu_0725 details

Gene Information

• Locus tag: Tneu_0725
• Symbol: rps17p
• ID: 6165734
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermoproteus neutrophilus V24Sta
• Kingdom: Archaea
• Replicon accession: NC_010525
• Strand: +
• Start bp: 645583
• End bp: 646023
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 641667878
• Product: 30S ribosomal protein S17P
• Protein accession: YP_001794110
• Protein GI: 171185191
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0186] Ribosomal protein S17
• TIGRFAM ID: [TIGR03630] archaeal ribosomal protein S17P

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 54
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACGGTCG TGAAGCTACA GTCTAGACCT CGCGCCGGCG ACGTCGTAAC TCTGCCCAAT 
GGAAAGAAGG TGGAGGTGAG AGACATAGGC TTGCCGTATG TTCAACCTCC GCTGGCCGTA 
TGCGACGACC CCCTCTGTCC TTGGCACGGG CATCTCAAGA TTAGGCTGAA GCTGCTTGAG 
GTCACCGTTG AGAAGGTCAG GATGCACAAA GCCGCCGTGG TGACCCACGA GTGGGTCCAC 
TACATACGTA AGTACAACCG CTACGAGCGT AGAAGGAGAA GGATCAAGGT GAGAGTCCCC 
GAGTGTATAG AGGTGAAGCC GGGGGACAAG GTGATCATAG CAGAGACGAG GCCGCTCTCT 
AAAACTATCT CCTGGGTTGT CATAGGCAAG AGGGAGGACC TAATCGCCTG GAAAGCCAAA 
CACGAGACCT TGACCGCCTA G 

 

Protein sequence

MTVVKLQSRP RAGDVVTLPN GKKVEVRDIG LPYVQPPLAV CDDPLCPWHG HLKIRLKLLE 
VTVEKVRMHK AAVVTHEWVH YIRKYNRYER RRRRIKVRVP ECIEVKPGDK VIIAETRPLS 
KTISWVVIGK REDLIAWKAK HETLTA