| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0699 |
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| Symbol | |
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| ID | 6165395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 626207 |
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| End bp | 627076 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641667852 |
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| Product | NMD3 family protein |
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| Protein accession | YP_001794084 |
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| Protein GI | 171185165 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1499] NMD protein affecting ribosome stability and mRNA decay |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTAAAG TGCCTTGCCC CTACTGCGGA CGTCTAGTGG ATAGACTTGT CGAGGGGATG
TGCGAAGACT GCTACTTCGA GAGACATCCT CTGGTGACTC TCAGGGAAGC CAGAGTTCTG
AGGTGTAAAT ACTGCGGGGC CGTGTTTCTC AGAGGTAGAT GGCTAAGACC TGGGAAAGGC
GGTGAGAAGG AGCTTATGGC GAAGGTTCTG GCCGAGAAGG CCTCCCTTAG CGGCGTAGTG
GAGGATCTAG CCGTCAGAGA GGGGGACGGC GGAGTTGAGC TGGAGGTAAC CGTGAGGGGG
TCACCGCATC CATCAATACA ACCGCGTGTC TATACGTACA AGCTCAAGCT GGAGCTTATC
TACGACCTAT GTATAAGCTG TAGAGAGATG TTAAGTAGGC GTGAGGTTGC GCTGTTACAG
ATCAGGGCAG CGCCAGGCGA GCTAACCGAC GACATGAGGA AAAAGATACT GAGCATAATA
GAGCAGGAGC TCTTTAAGCT AAAAGATAAA AAGATTGGTT TTATAAGCAA TATAAAATAT
ATAAGGACAG GTTTAGACAT ATATACAACA TCTACCAATC TAGCTCGCCA TCTGGCCTAT
GTTATACACA GGTCCTTCCC AAGCCACGTG GTCGAGACCG CGAAAGCCGT CGGCGTTAAA
GACGGGAGGA GGATATACCA CATGACCTAC CTCATACGCA TAGCCACGTA TAAGCCCGGC
GACGCGGTGA AGTTGAGAGG TAGAGATATG GTAGTCGTCG ACGTAGACAG TAAATACGTC
CACCTGCAGA ACAGGGAGAC GAAGGAGGTA GAGAGAATAC CGATCGAAGA TATCTTCACC
AAAGAGGTGG TGTATCTAGG CCACCTATAG
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| Protein sequence | MAKVPCPYCG RLVDRLVEGM CEDCYFERHP LVTLREARVL RCKYCGAVFL RGRWLRPGKG
GEKELMAKVL AEKASLSGVV EDLAVREGDG GVELEVTVRG SPHPSIQPRV YTYKLKLELI
YDLCISCREM LSRREVALLQ IRAAPGELTD DMRKKILSII EQELFKLKDK KIGFISNIKY
IRTGLDIYTT STNLARHLAY VIHRSFPSHV VETAKAVGVK DGRRIYHMTY LIRIATYKPG
DAVKLRGRDM VVVDVDSKYV HLQNRETKEV ERIPIEDIFT KEVVYLGHL
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