| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0698 |
|---|
| Symbol | |
|---|
| ID | 6165505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | + |
|---|
| Start bp | 624899 |
|---|
| End bp | 626212 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641667851 |
|---|
| Product | isocitrate dehydrogenase, NADP-dependent |
|---|
| Protein accession | YP_001794083 |
|---|
| Protein GI | 171185164 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0538] Isocitrate dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTAA ACATCGAAAA GGTCAAAAGC GAGATCTCCA ACGTCGTGCC CTTTAGCGGG
AAGTATATAG ATCCCCCGGA GGGGGAGTAC GTAACCTACT TGGGGCCCGG CCAGCTTAAG
GTGCCTGAGA AGGTCGTGAT TGGATACATT GAGGGAGACG GGATAGGGCC CGAGGTCGCC
TACGCCGCCA TCAAGGTAGC CAACGCCGCT GTGGAAAAGG CCTACGGAGG GTCTAGAAAG
GTCATATGGT ACGAGGTCGT GGTTGGGGAG AAGGGCGAGA AGATATTCGG CACCAGGCTA
CCTAGCCAGA GTGTAGACGT CTTGAAAAAG GTCAGGGTTT TCCTAAAAGC GCCGTTGGAG
ACCCCCGTGG GGGGAGGCTT CAGGAGCATC AACGTAACGC TACGCCAATT GTTCGACCTC
TATGCGAACA TACGGCCGGT TAAGTACTTC CCCGGCCTCC CCTCCCCGCT GAAGAAGCCA
GAGGTGGACT TGGTGATATT TAGGGAGAAC ACGGAAGATG TCTACGCCGG CATCGAGTGG
CCGTACGACA GCCCAGAGGC GGCAAAGGTG AGGGAGTTCC TCCGGAGGGA ATTTGGGATT
AACCTGAGGG ACGACGCCGG CATAGGCATA AAGCCCATAA GCAAATTCGG GACTCAACGC
ATCGCAAGGC TTGCTCTCAA GTTCGCGGTG GAGAACAAGA GGAGGGTGGT GACGGTTATG
CACAAGGGGA ACATACAGAA GTACACGGAG GGCGCCTTCA AGGAGTGGGC CTTTGAAGTC
GCCAGGACCG AGTTTAGGCA ACATGTCGTG TTCGAGGAGG AGCTTGGCCA ATACGGCGGC
CAGGTGCCTC CTGGAAAGAT ACTGGTAAAC GACAGAATAG CCGACAACAT GCTACAGCAG
CTACTGACCA GGACAGGCGA ATACGACGTC ATACTGGCCC CCAACCTAAA CGGCGACTAC
GTCTCAGACG AGGCCGCAGG CCTCGTGGGA GGCCTCGGCG TGGCTCCAGG CATAGATGTT
GGAGACTGGG GGATGATGGC CGAGCCCGTC CACGGCACCG CGCCCAAGTA CAGGGGTAAA
AACTACGTGA ATCCCACCGC CACGATCCTA GCCGTGGAGC TTCTATTTAG ATTCATGGGG
TGGATAGAGG CCGCCTCCTA CATATCGAAG GGCGTAGAGG CTACGTATAG GTCGGGCTAC
TACACCGCGG ACTTGGTAAG ACAGATGGAC GAGGAGGAGA AGAGACGTGT AAAAGAGGTG
TTGGGCACGC AGGAGTTCGC AGACAAAGTT GTGGAGCTGA TAAAGGCCCT ATAG
|
|---|
| Protein sequence | MAVNIEKVKS EISNVVPFSG KYIDPPEGEY VTYLGPGQLK VPEKVVIGYI EGDGIGPEVA
YAAIKVANAA VEKAYGGSRK VIWYEVVVGE KGEKIFGTRL PSQSVDVLKK VRVFLKAPLE
TPVGGGFRSI NVTLRQLFDL YANIRPVKYF PGLPSPLKKP EVDLVIFREN TEDVYAGIEW
PYDSPEAAKV REFLRREFGI NLRDDAGIGI KPISKFGTQR IARLALKFAV ENKRRVVTVM
HKGNIQKYTE GAFKEWAFEV ARTEFRQHVV FEEELGQYGG QVPPGKILVN DRIADNMLQQ
LLTRTGEYDV ILAPNLNGDY VSDEAAGLVG GLGVAPGIDV GDWGMMAEPV HGTAPKYRGK
NYVNPTATIL AVELLFRFMG WIEAASYISK GVEATYRSGY YTADLVRQMD EEEKRRVKEV
LGTQEFADKV VELIKAL
|
|---|
| |