| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0622 |
|---|
| Symbol | |
|---|
| ID | 6166316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 561612 |
|---|
| End bp | 562823 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641667774 |
|---|
| Product | amidase |
|---|
| Protein accession | YP_001794007 |
|---|
| Protein GI | 171185088 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGGGG TGGAGAAGGC GTTGGAGGAG GCCAAGAGAC GCGCCGATCT GAACCACTAC
CTGTACATCA ACGAGAGGGC TGTAGACGAG CTGGAGTTGC TACGGAGGTC CGGGCGTTGC
GGCGCACTGT GCGGAGTCGC CCTCGCCGTG AAGGACAACA TAGAGGTGGC CGGGATGCCT
ACGACAAACG GCGCCCCCTA CATGAAGAAG ATGTCGGATA GAACAGCCCC CGTGGTGAAA
ACGCTTCTCT CCGAGGGGGC TGTGGTGGTG GGAAAGACAA ACATGCACGA GCTTGCCCTA
GGCGCCACAA ACGTAAATCC ACACTTTGGA CCGGCCAAGA ACCCCCACGA CCCTGGCCGC
ATAACCGGGG GCTCAAGCGG GGGGAGCGCC GGCGCGGTGG CCGTAGGCGC TGCGGACCTC
GGGATAGGGA CTGACACGGG GGGCTCCGTG AGGATCCCCG CCGCGCTCTG CGGCGTGGTT
GGCTACAAGC CGCCGTATGG GAAGATCCCA ACCGAGGGCG TCCTCCCGCT AGCCCAGAGC
CTAGACCACG TCGGCTTCCT CGCCAGAACC GTCAAGGAGC TTGTGGACGT TCTATCGGCG
GTGGGGTGGG CGCCCCGCGG GCTACAGAGA CCCAAGAGGT TCAGATTCGC CGTGTTGCTG
GGGATCTCGG AGCCGACGCG CTACGTCGAG AAGGCCTTCT GGAGGGCGGT GGCCGCGCTG
GAGTCGATAG GGGGCGAGAG AGACGAGGAA TTTTTAAACG CGGCGAGGTA TTCAGCCGCC
AGAGCCGCCC TCTTGCTCTC AGAGGCCGCG GCGAATTACT ACGGATATCT CAGAAGCATG
GGAAGCCAGA TGGGCCGCGA CGTAGCGACG TTGTTGAGCG CCGGCGCCGC CCTCCCCGCA
GTTGCCTACA TCGTAGCCCG CCGCGTCAAA GAGGAGGCCA CCGCCTACTT CAACTCGCTG
TTTAAGAAAT ACGACGTGGT CGTAACGCCG ACTACCGCCA CCGAGGCCCC CCGTATAGAG
GAGGTGGAAA ACGTGGCCGT TAGACCCAAG CTACTGGCAT ACACAGAGCT CTTCAACTTA
ACGGGTCACC CAGCCATTTC CGTCCCCGCT CCCGTCTCTG GACTGCCGGT AGGTCTCCAG
ATCGCTGCGG CGGACGAGGA GGTGCTCCTC TCCATCGCGT CGGCCTACGA GGAGGAGGCG
CTTCTTAGGT AG
|
|---|
| Protein sequence | MRGVEKALEE AKRRADLNHY LYINERAVDE LELLRRSGRC GALCGVALAV KDNIEVAGMP
TTNGAPYMKK MSDRTAPVVK TLLSEGAVVV GKTNMHELAL GATNVNPHFG PAKNPHDPGR
ITGGSSGGSA GAVAVGAADL GIGTDTGGSV RIPAALCGVV GYKPPYGKIP TEGVLPLAQS
LDHVGFLART VKELVDVLSA VGWAPRGLQR PKRFRFAVLL GISEPTRYVE KAFWRAVAAL
ESIGGERDEE FLNAARYSAA RAALLLSEAA ANYYGYLRSM GSQMGRDVAT LLSAGAALPA
VAYIVARRVK EEATAYFNSL FKKYDVVVTP TTATEAPRIE EVENVAVRPK LLAYTELFNL
TGHPAISVPA PVSGLPVGLQ IAAADEEVLL SIASAYEEEA LLR
|
|---|
| |