| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0577 |
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| Symbol | |
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| ID | 6165692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 528469 |
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| End bp | 528756 |
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| Gene Length | 288 bp |
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| Protein Length | 95 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641667730 |
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| Product | CRISPR-associated Cas2 family protein |
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| Protein accession | YP_001793965 |
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| Protein GI | 171185046 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1343] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR01573] CRISPR-associated endoribonuclease Cas2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0715298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0619602 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCTGGC TGGCCGTCTA CGACATCGAA GACGACGGAG AGAGGGCCAA AGCCGCCGCG
GTGCTACAGG AGTGGGGGTT TGTCAGAGTG CAGAGGAGCT TCTACGTGGG GAGGCTGGAG
AGGGGGAGGG CCAAGGACCT GCTCCACATC CTCTCTAGAT ATGTAAAAAG GGGGCACATA
GCCTTGATAC CCGTGTCGAG AGAGCAGCTG GAGGCCGCGC TCGAGCTAGG CAAGCCCCCC
TACGCCCCCC TCAAGCCGCC TAGATATGCC CAAGCCTACG TCATATAG
|
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| Protein sequence | MIWLAVYDIE DDGERAKAAA VLQEWGFVRV QRSFYVGRLE RGRAKDLLHI LSRYVKRGHI
ALIPVSREQL EAALELGKPP YAPLKPPRYA QAYVI
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