| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0567 |
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| Symbol | |
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| ID | 6165635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 519949 |
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| End bp | 520737 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641667720 |
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| Product | CRISPR-associated RAMP Cmr6 family protein |
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| Protein accession | YP_001793955 |
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| Protein GI | 171185036 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1604] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01898] CRISPR-associated RAMP protein, Cmr6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.123695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00248457 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAGAGGC CGAAGAAGAG GGAGGAAAGG GAGGTAGACT ACGGCAAGTA CTTCTCAAGC
TGCGCAGGCG ACTACAACGT GGTGTCCTGC GTCAACCTGG CGTTTCTAGA GGCTTCTAGA
GACCTGGCGA GGCAGAACAT CAGGCTCAGG ATCCCCGAGT TCTCGCGGTG GGCCGTCTTA
ACGCTCCACC AGAGGCCGCC GCAGATGTGG GACCAGGTCA AGCGCTACCT CGAGCTGGTC
TACGCGGCGG CCAGAGGGGC GTTTCAAAAC GTCTTCAAGT TCGAGTTCTC CCTAGAGACC
CCGCTCACTA TACACACCAG ATGGCCCTAC CTCCCCCTGG AGATAGGCAT AGCGTGGCAC
CCCATCCTCA ACGTGCCCTA CATCCCGGCG AGCTCCCTCA AGGGAGCCCT CAGGGCGGCC
GCGCCCGAGC CCGTCTGCGA CTTCACCAAG GCGGAGCTCT TCGGCACCGC CCAGGAGGAG
GGGCTGTTGG TGGTCTTCGA CGCGTACCCC ACCGGCGGCA AGGCGGTGAG GCCAGACGTG
GTGACGCCCC ACTACAGAGA GGTGGAGGGC GAGATAGCGG AGACTCAGGC GAGCCCCGTC
CCCCTCGTCT TCCCCACCGT CCCCCCGGGC ACAAAGTTCC AGTTCATGGT GGGAATTCTG
CCGAGAGACG AAAAGAGGGA GGTTGACTAT AAGAAGTGCG AGATGGAGTT GTTCGACGCA
GTGAAGAAGA CGCTGGTGAG GGGACTGGGC GCGAAGACCG CAGTAGGGTA CGGCGTCTTC
AAAATTTAA
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| Protein sequence | MKRPKKREER EVDYGKYFSS CAGDYNVVSC VNLAFLEASR DLARQNIRLR IPEFSRWAVL
TLHQRPPQMW DQVKRYLELV YAAARGAFQN VFKFEFSLET PLTIHTRWPY LPLEIGIAWH
PILNVPYIPA SSLKGALRAA APEPVCDFTK AELFGTAQEE GLLVVFDAYP TGGKAVRPDV
VTPHYREVEG EIAETQASPV PLVFPTVPPG TKFQFMVGIL PRDEKREVDY KKCEMELFDA
VKKTLVRGLG AKTAVGYGVF KI
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