| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0563 |
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| Symbol | |
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| ID | 6165902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 514713 |
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| End bp | 517409 |
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| Gene Length | 2697 bp |
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| Protein Length | 898 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641667716 |
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| Product | CRISPR-associated RAMP Crm2 family protein |
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| Protein accession | YP_001793951 |
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| Protein GI | 171185032 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1353] Predicted hydrolase of the HD superfamily (permuted catalytic motifs) |
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| TIGRFAM ID | [TIGR02577] CRISPR-associated protein, Crm2 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.406769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00098252 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACTTTT CAAAAAAGGC GGCTCTCCTG CTGTCGAGCC CCCCGCACTG GGAGGAGGAC
GGCCAGGTAA GAGAGCTCGT CGAGAGGGTG CGCAGGGCCC TGGGGGCCGA CGCCGGCGGG
GACCTCGTCG AGAGGATTAG GGAGTACGTG TGGGGCGGCA TGCCGAGAGG CGGCGCTCCA
TACGGCTACA TACACAACGT CTTCTCCCCC ACGCTGAAGA GGGAGCTGAG GAAGCCGCCG
GCGGAGGAGG TCAGGGCGTA CTGGAGGGAT CTCGCCGAGG TTGTCGAGGG CGCCGGCGGT
AAATACCACG TCTTCTACGC CGCCTACGAG GCGCTTTGGA TCAAGAGGGG GCTGTCGGCA
AGGGTGGCCA ACCCCCTGGC GCCCTTCTAC GACGCCTTCG ACGAGGCCTA CGCCATGGCC
ACGCTCGCCA ACTGGTTTTC CGACGGCGGA GAGCCCTCGG GGTACTTCGT AAACGCCGAC
GTGCCGGGGG TCCAGGACTT CGTGGGGGCC GGGAGGAAGG CCGGCGACTT CTGGGCCGGC
AGCTGGGCCC TCTCCATTGC CGTCTGGCTG ACCGCCTGGC CTTTCGTCGA GAAGTACGGC
CCCGACGTAC TGCTGAGGCC AACCGCGAGG CTCAACCCGT ACTACTTCTA CTTCATCCGC
GGGAGCTCCC AGAAGCTCGA CAAGCATCTC AGAGACGTCA TGCGCGAGGT CGGCTTCACG
CCCCCAGAGC CGGCGTGGAT AATGCAGCCC CTCATCGGCG AGAAGATCCA GCTAGTGCTC
CCCCGCAGGT GGAGTAGCGA GGAGGAGGTG GTGAGGGAGG TCGTGGAGGG GTTTAAAAAG
GCGCTGGACT GCCTCACCGG CCTCGCGAGG GGGCACGTCT GCGACCTGCT GAGGGGCCAC
ATAGACGTAA TTCCGAGCGG CGGCTGCTTT GACGCCCTGT ATAGGCTTGG GGACTACGCA
GAGGTGAGGC TCCCGCTTAG GGTCACAGTC ATTGACATAG GGGAGTACTA CCGGGAGCTT
AGGGATAAGT ACTGCGCCGG CGCCGACCAC TGCCCCGTTC TAAAAATCGC CTTTTTCGAC
GAGCTACTAC GGAACTCGCA CGCAGCCGTA GGCTTTCAGA TGTCTCTAGA GAGGCAGCGG
AGGAGGGTGC CCACGGCCGG GCCCTACTTC CACCCCGCCG CCTTCGACGA GGTGAAGCCG
GCCTTCAAGA CGCCGGGGCC CGCCGCCTCT ACACACGTGT TTTTCAACGA GAAGACGTGG
CGCGTCTGTA CAGTCTGCGG CTCCGAGCCG GCGGTCGTTG GGCTTAGGAA GGTGAGAACC
CCCACGGGGA AGGAGGACTA CAACCCAGAC GATCTAGAGG CCTTTATAAA CGCGCTGGGG
GCCAACTGCG AAGACTTCGA GAGGCATCTA AGGAGGGTCA TACGCCCCGG GGAGTTCCTG
GGGCCCAGGT GCCTCGCCAA AAGGCTGATA TACCTCAGGG CGAAGCCCTC CAAGCAACCA
GGCGAGGAGC CGTTGCCTGA GGAGAAGCTC CAGAGGTTTG AAAGCACGGA GGACGTGGCC
GTGGCTGTGG TGGCCAAGGT GGGAGAGGCG TTGGAGAGGG AGGCCCAGAA GATTAAAGAC
GGGAGGAGTG GGGCGTGTCT CAAGGTCGCG GACTATCTAA CGAAGGGCGG GGGGCGCGAC
CTGGAGATGG TGTGGGGAAC CGCCGAGGAC ATGAAGAGGG AGTGGGAGGA GTGTATCAAG
GCCCTTGAAA AGGCGGAGGT GGACCTCGGC GGGTTGGCGG CGGGGGCCGG ACTCGCGGGG
TGGCCGCACA GCGCCGCGCT GGGGCCCAGG CTCTTCTACG CAGTCGTCAG GGGAGACGGC
GACAGCATGG GCGAGCTCCT CGACGGGAGG CTGCCGGCTA GGTGGTATGA AGAATACGAG
AGGGCGCTCG GCGGGGGGCT GGCCGGCGTG GAGGAGTACT TCAAGGCCGT GAAGAGCTAC
CTTAAGCGCC ACGTGGGGGA GGATGCGGAG CAGACAGTGC CCATAACTCC CCTCTACCGC
GTCGCCATAA ACAGATCGCT GGTTGTGACG TCGCTTAGAG ACTGGGCGGC CGTGGAGGGG
GCCTCCGGAA TGTTGATATA CGCAGGAGGC GACGACGTGG TGGCCCTCGC GCCTGTGGAA
AAGGCGCTGG ACGTGGTGGC GCAGACCAGG CAGAACTTCT GGGGGGGCGG CTTCCACAGC
GTCGGCGGCT ACCACATACC ACAGCTGGCG GCCTACGGGA GGAGCTACGC CGTGAGGTTC
GTACATGTGA TGGACATAAT GTCCATCGAG CTGAGGAAAT CCCACGAGGA CCTAGAACGC
GCAAAAGACG CCGCGTGGGA GAGGCACAGG AAGGACTCCG TAGCCGTGGC CTCCTCGAGG
ACCCAGCACG CCGCCGTCCT CCCCCTTAGA GACGTCTCCA CAGTGGACAG ACTGAAGCTC
GCGTGGCTCT ACATGCTCAA AGACGCCATC AGCAAAAACG CCCCCCACGA CGCCGAGAGG
AGGCTTAACG GGGACCTCGA CGCAGACGCC ACCTACAGAG TGGCCGAGCA CGTCCTCAGG
AGGAACGCCA AAGACGGCGG AGCCGCCGCG CAGATAGCCT CATGGCTCCG CGGGGCGTCC
CCGAGGTATA TAAGGGAGTT CTTCGGCGCA CTCGCCGTGT TGAAGGGGGT GCTATGA
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| Protein sequence | MDFSKKAALL LSSPPHWEED GQVRELVERV RRALGADAGG DLVERIREYV WGGMPRGGAP
YGYIHNVFSP TLKRELRKPP AEEVRAYWRD LAEVVEGAGG KYHVFYAAYE ALWIKRGLSA
RVANPLAPFY DAFDEAYAMA TLANWFSDGG EPSGYFVNAD VPGVQDFVGA GRKAGDFWAG
SWALSIAVWL TAWPFVEKYG PDVLLRPTAR LNPYYFYFIR GSSQKLDKHL RDVMREVGFT
PPEPAWIMQP LIGEKIQLVL PRRWSSEEEV VREVVEGFKK ALDCLTGLAR GHVCDLLRGH
IDVIPSGGCF DALYRLGDYA EVRLPLRVTV IDIGEYYREL RDKYCAGADH CPVLKIAFFD
ELLRNSHAAV GFQMSLERQR RRVPTAGPYF HPAAFDEVKP AFKTPGPAAS THVFFNEKTW
RVCTVCGSEP AVVGLRKVRT PTGKEDYNPD DLEAFINALG ANCEDFERHL RRVIRPGEFL
GPRCLAKRLI YLRAKPSKQP GEEPLPEEKL QRFESTEDVA VAVVAKVGEA LEREAQKIKD
GRSGACLKVA DYLTKGGGRD LEMVWGTAED MKREWEECIK ALEKAEVDLG GLAAGAGLAG
WPHSAALGPR LFYAVVRGDG DSMGELLDGR LPARWYEEYE RALGGGLAGV EEYFKAVKSY
LKRHVGEDAE QTVPITPLYR VAINRSLVVT SLRDWAAVEG ASGMLIYAGG DDVVALAPVE
KALDVVAQTR QNFWGGGFHS VGGYHIPQLA AYGRSYAVRF VHVMDIMSIE LRKSHEDLER
AKDAAWERHR KDSVAVASSR TQHAAVLPLR DVSTVDRLKL AWLYMLKDAI SKNAPHDAER
RLNGDLDADA TYRVAEHVLR RNAKDGGAAA QIASWLRGAS PRYIREFFGA LAVLKGVL
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