| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0554 |
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| Symbol | |
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| ID | 6165802 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 506564 |
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| End bp | 507503 |
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| Gene Length | 940 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 56% |
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| IMG OID | 642485770 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4945] Membrane-anchored protein predicted to be involved in regulation of amylopullulanase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000194226 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000000786204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGTAGGGA GAGCCACGTT GGCGTTGTTG GCGCTTGCGG CTCTGGCGAT CAGCGCAACC
GTCGTCGTTG TCGAGGTGCC GGACGTAGAC GTGCAAAAAG TTGTCGTATT TAGAGTCACC
GACGGCGATA CTGTGGAAAC GTCCGTGGGC AGAGTTAGGC TTGTGGGCTA CGACGCTTGG
GAGTGGGACG AGCCGCGCGG CCCAGAGGCC AGATATTTCC TCAGCGGCTT TTGCGGCGGC
ACAGATTACT TAGACGTAGA TGACCTAGAG CCGAGAGATA GATATGGGCG TATATTTGGC
TACCTCTGGT GCGACCGCGC CTTTGAGGTC GGCGGCATCT ATTATACGGC GTATGCCTCT
GTACAGAAGG CTTTTCTGCT CGTTAGGCCT GACCTCGTGA AGAGGACGCT CCACGTCCCG
CCGGATGAGC ACCCATAATG GCACTGGCTC AAGCGCTTCA CTGTCGCCTT CGACCGCCCC
GTCAAATTAG TTGTCTTAAA TACTACGTCG GTCGCGACTA GCCGAATCTT CAAATTTGAC
AATGCGACAC AAGTAGTGCT CACTTGCGGC GTCTACAAAG TGTATATAGA TGGGTATGAG
ATTGCCAATT TGACGTCGTG CCAAGACACA AAGCTTTCAA TAGAGGGGGC GCTGGCTACA
GCCACCACGA CTATGCCCAC CGTGGCCACC GTCACGGAGA CCGTGACTGT CACAACGACC
GTTACGAGGC CTATCACGGT AACTTAGGAC AGAGACGTTG ACAGTGACCA AGACGGAGAC
GTCCACAGTC ACTAAGACGG CGACACAATA CGTCACGACC ACGGCGACTG TCGCGCAGAC
GGTCTACGTG CCGTACGTCG ACCCCATCAG TTACGTCGTG TTGGGAGTCG GAGTTGTCCT
AGGGATAGTT GGGGCGGTTG CGCTTGCGAA AAGAAGATAA
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| Protein sequence | |
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