Gene Tneu_0552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0552 
Symbol 
ID6166153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp503870 
End bp504793 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content66% 
IMG OID641667705 
Productphosphate ABC transporter, inner membrane subunit PstC 
Protein accessionYP_001793941 
Protein GI171185022 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0573] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR02138] phosphate ABC transporter, permease protein PstC 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000932334 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000613799 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTGGGCT TCGTCTTGGC TGTGTTGGTG TTCCCCTATC TGGCGGCCGC CTTCGCCCTC 
CTCTTCCTCA AGATGAGGTG GGGGCTTAGG GCCTTCGGAG TCTTCGCGCT GGTGGCTGTG
GCCCTCCTCA TCGCCATGTT TCTCGCCTAC GCATATCCCA TCTTGGAGCG GGAGGGCCTC
GCCGTGTTCA CCTCGGCCGT TTGGGACCCG GCGCGGGAGG AGTACGGCGT GTTGCCCGCC
CTGGTGGGGA CCCTCGTCAC GTCGGCCGTG GCCATCTCGC TTGCCTTCCC CATGGCGGTG
GGGGTGGCCG TGACGATTAA CGAGGTTCTG CCGCCTAGGC TTAGGCCCCT CTTCGCCTCT
CTTGTGGACC TCACGGCGAC TATGCCCACC GTCCTCTACG GCCTCTGGGG GATCTTCGCC
CTGGGGCCTC TCCTCCAGTC GGCTGTAAAC GCGGTCTTTG GGCCCGGCGC TATGCCGTCG
CAGTATTCCC TCCTCACGGC TGGGGTTCTC CTGGCCGTCA TGGTGACGCC CTACGCCGCG
GCCGTGATTA GGGAGGGCTA CGCCGCTGTG CCTAGGCCCG TCGAGGAGGC CGTCTACTCC
CTGGGGGCCA CCAGGCTGGA GACCGTACTC GTCAAGCTTA GGCACATAAG GAACTACGTG
GTGGGGGGCA TCTTCCTGGC GCTTGGGCGG GCCATGGGGG AGACCGTGGC GGTGGCCATG
GTGGTTGGGG GCAAGCTCGG CTCTCTCCCC GCCGGCCTGT TCGACGGGGG GATCACCATC
TCCTCGCTGA TCGCCCTCCA GTTCCCCAAC GCCGCCGCCT ATAAGTACAT GACGGCGGCG
CTCTTCGCCG GGGCGCTTGC GCTGGCGGTG TTGGGCATAG CGATAAACGC CGCCGCCCTG
TACCTCATCA GGAGGTGGCA ATGA
 
Protein sequence
MLGFVLAVLV FPYLAAAFAL LFLKMRWGLR AFGVFALVAV ALLIAMFLAY AYPILEREGL 
AVFTSAVWDP AREEYGVLPA LVGTLVTSAV AISLAFPMAV GVAVTINEVL PPRLRPLFAS
LVDLTATMPT VLYGLWGIFA LGPLLQSAVN AVFGPGAMPS QYSLLTAGVL LAVMVTPYAA
AVIREGYAAV PRPVEEAVYS LGATRLETVL VKLRHIRNYV VGGIFLALGR AMGETVAVAM
VVGGKLGSLP AGLFDGGITI SSLIALQFPN AAAYKYMTAA LFAGALALAV LGIAINAAAL
YLIRRWQ