Gene Tneu_0550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0550 
Symbol 
ID6165748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp502235 
End bp502987 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content62% 
IMG OID641667703 
Productphosphate ABC transporter ATP-binding protein 
Protein accessionYP_001793939 
Protein GI171185020 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1117] ABC-type phosphate transport system, ATPase component 
TIGRFAM ID[TIGR00972] phosphate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0373794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000103016 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGAAGA TAGAGGCGAG GGGGCTGAGG GTGTCCTTCG GCCAGACGCA GGTCATCGCG 
GGGGTCGACC TCTCTATCCC GGACAGGAGC ATCACAGCGC TTATGGGCCC GTCGGGGAGC
GGCAAGTCGA CTCTTCTGAG GGTGTTCAAC CGGCTGATCG AGCTGTACCC CGAGGCTAGA
GTGGCGGGGG AGGCGTATCT AGACGGGAGG GACATATTCA AGATGGACGT GGTGGAGCTC
AGGAGGAGGG TCCAGATGGT CTTCCAGATC CCCAACCCCA TCCCCAACCT CTCCATCTTT
GAAAACGTGG CCCTGGGCCT TAAGCTCAAC CGGCTGGCGA AGAGCAGGAG GGAGCTCCAG
GAGAGGGTTA GGTGGGCTCT GGAGAAAGCC CAGCTGTGGG ACGAGGTGAA GGACAGGCTG
GGCGCCCCCG CGGGCAAGCT CTCGGGCGGC CAGCAGCAGA GGCTCTGCAT GGCGCGGGCG
CTTGCGTTCC AGCCCGAGGT ACTCCTCGCC GACGAGCCCA CCGCGAATCT GGACCCGGAG
AACACTGCGA AGATAGAGGC GCTCTTTCTA GAGCTGAAGA AGGACATGGC CATCGTCATG
GTGACCCACT TCCCGCAACA GGCGGCGAGA ATCAGCGACT ACGTGGCCTT TTTGTACAGG
GGGCAGATCG TGGAGTGGGG CGCCACCAGA GACATCTTCA CGAACCCGAA GCACGAGCTA
ACCGAGAGGT ACGTAACCGG CCGGTTGTAT TAA
 
Protein sequence
MSKIEARGLR VSFGQTQVIA GVDLSIPDRS ITALMGPSGS GKSTLLRVFN RLIELYPEAR 
VAGEAYLDGR DIFKMDVVEL RRRVQMVFQI PNPIPNLSIF ENVALGLKLN RLAKSRRELQ
ERVRWALEKA QLWDEVKDRL GAPAGKLSGG QQQRLCMARA LAFQPEVLLA DEPTANLDPE
NTAKIEALFL ELKKDMAIVM VTHFPQQAAR ISDYVAFLYR GQIVEWGATR DIFTNPKHEL
TERYVTGRLY