| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0549 |
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| Symbol | |
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| ID | 6165335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 500804 |
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| End bp | 502165 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641667702 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001793938 |
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| Protein GI | 171185019 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.183642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000167924 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCTCGA AAACCGCTTT GGCGGTAGTC GGGTTGGTGG CGGCGGCCCT CTTGGTGGGA
ATAGCTCTTT TCGCGCCGAA GAGCCCCCCG CCGGCCGTCG CTCCCCCGCA ATACACCTCA
ACTACCACGG CGCCGCAGAC AACCGCCGCC GCATGCCCAG ACGAAATAAC CATCGGCACA
GCGATGCCGC TGTCGGGGAG ATACGCAGCC GAGGGGCAAT ACTCCCTCTG GGGCGCGCTG
GCTGTGGTGA ACTGGGTCAA CGACAGAGGC GGAGTCGACT GCGGCGGCAA GAAGGTGAAG
GTGCGTCTGG TGTATAGAGA CAGCGAATCT AAGCTGGAGC TGGCCCAGAG CATAACCGAG
TCGCTGGTGA CGCAGGATAA GGTCAACTTC CTGCTCAGCC CCTACGGCTC CGACCTAGCC
CTAGGCGTCT CGTCTATCGC CGAGAAATAC GGCGTGTTGA TGGCTGTGGT CGGCGCCTCC
TCAGACCGCA TCTTCCAGCA GGGCTTTAAG TACGTCGTTG GCGTGGCCGC GCCGGCGAGT
CAATACATGG TCCCCGTGTT AGACATGGTG GTGAAGCGTG ACCCCACGGC GAAGAGGGTG
GCCATCTTAT ACAGAGACAG CGAGTTTAAC AGACAGGTGG CAGAGGGGGC AAAGGCCTAT
GCGGAGAAGC TGGGTCTCCA GGTGGTGCTG TACGAGGCCT ACCCCGCCTC TCCCAAGGAT
CTAACGCCAC AAATTCTGAA GGTTAAGCAG GCGGCGCCAG ACGTCATAAT AGTGGCCTCT
CACTTCGCCG ACGGCCAGCT CGTGGTTAGG CAACTGGCCG AGCAGAAGGT CGACGCCAAG
CTCATCGCTT TGTCTGTGGC GCCTCTGGTG CCGGACTTCT ACAAGGCGCT GGGGACAAAG
GCCGAGTGCG TCGTCGGCCC CTCGCACTGG GAGCCCGGCG TCACCTACAG CCCGCAGCTC
GCCAAGCAGA GAGGCGAGGA CTGGTTTGGA CCCACGAAGG AGGAGTTCAT AACGTATTTC
AAGAAGGTGG CTAAGGAGAT GGGCGGCAGA GAGGTGGAGC CGGGCTACCA CGCCGCTTGG
GCCGCCGAGG GGGTACTGGC CATACTATAT GGGGTGCAGA AGGCCGCCTC GGCGGATTCG
GACAAGGTGC TCAACGCGTT GAGGGGCTCC AGGTTTATGA CCTTCTTCGG CGAGTTTAAG
CTCGACCCGG CTACGAACTT GAACGTGGCC CACACGATGG TCGTCGTCCA GTGGCAGGGC
GGCCAGAGGT TGGTCGTCTG GCCTGCCGAC GTAGCCGAGG GGAAGCTGGT CTACCCCTCT
CTGACGTGGG ATCAGAAAGC CGCTGGACAG CTCTGTAGGT AA
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| Protein sequence | MASKTALAVV GLVAAALLVG IALFAPKSPP PAVAPPQYTS TTTAPQTTAA ACPDEITIGT
AMPLSGRYAA EGQYSLWGAL AVVNWVNDRG GVDCGGKKVK VRLVYRDSES KLELAQSITE
SLVTQDKVNF LLSPYGSDLA LGVSSIAEKY GVLMAVVGAS SDRIFQQGFK YVVGVAAPAS
QYMVPVLDMV VKRDPTAKRV AILYRDSEFN RQVAEGAKAY AEKLGLQVVL YEAYPASPKD
LTPQILKVKQ AAPDVIIVAS HFADGQLVVR QLAEQKVDAK LIALSVAPLV PDFYKALGTK
AECVVGPSHW EPGVTYSPQL AKQRGEDWFG PTKEEFITYF KKVAKEMGGR EVEPGYHAAW
AAEGVLAILY GVQKAASADS DKVLNALRGS RFMTFFGEFK LDPATNLNVA HTMVVVQWQG
GQRLVVWPAD VAEGKLVYPS LTWDQKAAGQ LCR
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