| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0535 |
|---|
| Symbol | |
|---|
| ID | 6165710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | + |
|---|
| Start bp | 485872 |
|---|
| End bp | 486675 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641667688 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001793924 |
|---|
| Protein GI | 171185005 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2107] Predicted periplasmic solute-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.766739 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0869709 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCAAGG TGGCCCATTC TCCAGACGCG GACGACGCCT ACATGTTCTA CGGGATCGCG
TCGGGGGCTG TTAAGATGCC GGCGCCCCAC GTGGAGTTTC TGGCCGATAT AGAGACTTTG
AACAGGCTGG CGGTGGAGGA GCTACTCGAC GTATCCGCAG TCAGCGTACA CGCCTACGCA
TACGTCTGCG GTAGGTACTA CGTGATGAGG GTGGGCGCCT CCATGGGGGA GGGGTACGGC
CCCGTGGTGG TGGCCAGGCC GGAGGCGGAT AGGCCGAGGC ACGTGGCAGT GCCCGGGCGC
TACACCACCG CCGCCCTCCT CCTCAAGCTG GCCATGCCGG GGGTGAAGGC CGTGGAGGTG
CCCTTCGATA GAGTGCTGGA GGCGGTGGCG GCGGGCGTCG TGGACGCGGG GGTGCTTATC
CACGAGGGGC AGATCACCTA TGGGAGATAC GGCTTGAGGA AGCTGCTGGA CCTAGGCGAG
TGGTGGCTGA GGGAGACGGG GCTCCCCACG CCGCTTGGGA TAGACGTGGT TAGGAAGGAG
TTGGGGAGGG GGCTCGCCGA GGCCCTTGCA GAGGCCCTCC GCAGCTCCAT CAGATACGCC
GATGAGCACA GGGAGGAGGC CCTTAGATAT GCCCAGAGGT TCTCAAGGGG GCTCAGCCTG
GAGGACACCG CCCGCTTTGT CGACATGTAC GTCAACGCCT ACACGAGGGA CCTAGGCTCC
AGGGGGGAGA AGGCCATCGA GGAGCTCCTG GCCCGGGCTT CGGAGGGGGG GCTGGCGCCC
GCGTGCAGGC CTGAGTACGT GTGA
|
|---|
| Protein sequence | MIKVAHSPDA DDAYMFYGIA SGAVKMPAPH VEFLADIETL NRLAVEELLD VSAVSVHAYA
YVCGRYYVMR VGASMGEGYG PVVVARPEAD RPRHVAVPGR YTTAALLLKL AMPGVKAVEV
PFDRVLEAVA AGVVDAGVLI HEGQITYGRY GLRKLLDLGE WWLRETGLPT PLGIDVVRKE
LGRGLAEALA EALRSSIRYA DEHREEALRY AQRFSRGLSL EDTARFVDMY VNAYTRDLGS
RGEKAIEELL ARASEGGLAP ACRPEYV
|
|---|
| |