Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_0534 |
Symbol | |
ID | 6165723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 485061 |
End bp | 485846 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641667687 |
Product | hypothetical protein |
Protein accession | YP_001793923 |
Protein GI | 171185004 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.055739 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGCCGG TCTTGAGGAT CCTGGCGGCG GCGTTTCTCT GGTCCACGAT AGGGGTCGCC GCTTCGCTGG GGAGGGAGTA CCTCTGGATA GCCTTCTTCA GGTCGCTCAC CGCGTCTCTG GCGGCTCTCG CGGCGGAGGC TAGGCCCGGG AGGGGGGCGC TTCTGCCGGG CCTCCTCCTC GGCGGCCTCT TCACGGTTTA TCCGGCGGCG GCTATATACG CGGGGATTGG AAACGCCGCG TACCTCCTCT ACACGGCCCC CCTCTGGACA GCCCTAGCCC TCGCCCTGTG GGGGGAAAGG CCGTCTAGAC GCGACGGCGT GGGGGTCGCC CTCGTCTTCG CGGCCGTGGC GCTTATGGCC TCCTCGGGCG GGATCTCGGG GGTCGGCTTC GCCGCCGGCT TAGCCTCGGG CCTCTTCTAC GGCTTGTACA TCGCCGCCGC CAGGAGGCTC GCGGCGGGCG GCCGCGCGGT GGACGCGTCG CTTGGGGCTA TGCCCTATAC GCTGGCCGTC ACCGCACCGG CCCTTCTGCT GAAGCCCAGC CCCCCCACCC TGGAGGCCGC CGCCGCTGGG GTGTACCTCG GCGTGTTTGG GACCGTGTTG CCCTACAGGC TCTTCGCGTC GGCTGTCTCC AGGGTGGGGG GCGCCAAGGC CTCTGTCTTG GCCTCCCTAG AGCCGGTGCT CGCCGCCCTC TGGGGGGCCT TGTTTTTCGG CCAGAGGCCC ACAGCCCCGG AGGCCGCCGC CTACGTCTTA ATCACGGCGG CCGCCGTGGC GGCGGCGCGT AAGTGA
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Protein sequence | MGPVLRILAA AFLWSTIGVA ASLGREYLWI AFFRSLTASL AALAAEARPG RGALLPGLLL GGLFTVYPAA AIYAGIGNAA YLLYTAPLWT ALALALWGER PSRRDGVGVA LVFAAVALMA SSGGISGVGF AAGLASGLFY GLYIAAARRL AAGGRAVDAS LGAMPYTLAV TAPALLLKPS PPTLEAAAAG VYLGVFGTVL PYRLFASAVS RVGGAKASVL ASLEPVLAAL WGALFFGQRP TAPEAAAYVL ITAAAVAAAR K
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