Gene Tneu_0534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0534 
Symbol 
ID6165723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp485061 
End bp485846 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content71% 
IMG OID641667687 
Producthypothetical protein 
Protein accessionYP_001793923 
Protein GI171185004 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.055739 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGCCGG TCTTGAGGAT CCTGGCGGCG GCGTTTCTCT GGTCCACGAT AGGGGTCGCC 
GCTTCGCTGG GGAGGGAGTA CCTCTGGATA GCCTTCTTCA GGTCGCTCAC CGCGTCTCTG
GCGGCTCTCG CGGCGGAGGC TAGGCCCGGG AGGGGGGCGC TTCTGCCGGG CCTCCTCCTC
GGCGGCCTCT TCACGGTTTA TCCGGCGGCG GCTATATACG CGGGGATTGG AAACGCCGCG
TACCTCCTCT ACACGGCCCC CCTCTGGACA GCCCTAGCCC TCGCCCTGTG GGGGGAAAGG
CCGTCTAGAC GCGACGGCGT GGGGGTCGCC CTCGTCTTCG CGGCCGTGGC GCTTATGGCC
TCCTCGGGCG GGATCTCGGG GGTCGGCTTC GCCGCCGGCT TAGCCTCGGG CCTCTTCTAC
GGCTTGTACA TCGCCGCCGC CAGGAGGCTC GCGGCGGGCG GCCGCGCGGT GGACGCGTCG
CTTGGGGCTA TGCCCTATAC GCTGGCCGTC ACCGCACCGG CCCTTCTGCT GAAGCCCAGC
CCCCCCACCC TGGAGGCCGC CGCCGCTGGG GTGTACCTCG GCGTGTTTGG GACCGTGTTG
CCCTACAGGC TCTTCGCGTC GGCTGTCTCC AGGGTGGGGG GCGCCAAGGC CTCTGTCTTG
GCCTCCCTAG AGCCGGTGCT CGCCGCCCTC TGGGGGGCCT TGTTTTTCGG CCAGAGGCCC
ACAGCCCCGG AGGCCGCCGC CTACGTCTTA ATCACGGCGG CCGCCGTGGC GGCGGCGCGT
AAGTGA
 
Protein sequence
MGPVLRILAA AFLWSTIGVA ASLGREYLWI AFFRSLTASL AALAAEARPG RGALLPGLLL 
GGLFTVYPAA AIYAGIGNAA YLLYTAPLWT ALALALWGER PSRRDGVGVA LVFAAVALMA
SSGGISGVGF AAGLASGLFY GLYIAAARRL AAGGRAVDAS LGAMPYTLAV TAPALLLKPS
PPTLEAAAAG VYLGVFGTVL PYRLFASAVS RVGGAKASVL ASLEPVLAAL WGALFFGQRP
TAPEAAAYVL ITAAAVAAAR K