Gene Tneu_0529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0529 
Symbol 
ID6165840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp479148 
End bp479753 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content64% 
IMG OID641667682 
Productprotein of unknown function DUF71 ATP-binding region 
Protein accessionYP_001793918 
Protein GI171184999 
COG category[R] General function prediction only 
COG ID[COG2102] Predicted ATPases of PP-loop superfamily 
TIGRFAM ID[TIGR00290] MJ0570-related uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.111834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.30018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTGG CTTTCTTCTC CGGCGGTAAA GACTCCGTCT ATGCGGCGTT GCTGGAGTGG 
CCCGTGGACA TGTTCTTCAT CTCCGTCTAC AGCTTCCCAC GCCCCTCTCC CCACCTCGTG
AACCTACACA AGACCGTGGA GCTTGCGGTG AAGCTCGGGG TGCCGACGCT GGTGGTGAAT
CTGCCCAAGG GCGCCGAGCG GAGGACAAAG GCGGATCTGC TCCGGCGGCT CGGCGCAAGG
GTCCTGGTGG CGGGGGACCA GGCGGTGGAG GAGCACCTCC GCTACATGGA GCAACTCGCC
AGGGAGGCAG GCGCCGAGCT GAGGGAGCCC CTGTGGGGCA GAGACCCCGC GCAGATCCTC
TACGAGGAGG CGGAGAAGAT GGAGTTCATA GTCATCGGGG CGCTAGACAG GTCCATAGTC
TGCAGGCGGG TTGGGAGGGA GAACGTCGCC GACTTCCTCG CCGACCTCAA AAAACTCGGC
ATGGACCCAA TAGGCGAGAG GGGGGAGTAC CACACCCTGG TCACCAGGGT GGGCGCCGTC
GCGCTGGATG TGCAGTGCGG CGCCGTGGAG AAACACGGCG ACTACTACAT AGCCCGGCTG
GTATGA
 
Protein sequence
MKVAFFSGGK DSVYAALLEW PVDMFFISVY SFPRPSPHLV NLHKTVELAV KLGVPTLVVN 
LPKGAERRTK ADLLRRLGAR VLVAGDQAVE EHLRYMEQLA REAGAELREP LWGRDPAQIL
YEEAEKMEFI VIGALDRSIV CRRVGRENVA DFLADLKKLG MDPIGERGEY HTLVTRVGAV
ALDVQCGAVE KHGDYYIARL V