Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_0512 |
Symbol | |
ID | 6165906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | - |
Start bp | 463817 |
End bp | 464815 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641667665 |
Product | glycosyl transferase family protein |
Protein accession | YP_001793901 |
Protein GI | 171184982 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.333543 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0212154 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCGTGA AGATAAAGAT CGCCGTTGTC GTCAGGGCAT ACAGGCGCTA CAGCTACCTT CCCCAAGCGG TTGAGTCCGC CCTAAGGCAG ACCAGAAGGC CAGACGCCGT TGTTGTAGTG GCCGACGACG TCGACAAGCT AAGGGGCTAC CCCGTCTACG CGCTTGAGAC AAAGACGGAC AAGCTGGGCG AGGCCGTAGC GGCGGGGATC AAGGCGGCCG AGGGAGACGT CGTCGCCTTC CTAGAAGACG ACGACCTCTT CCACCCAGAG AAGCTACAGA CGGTGGAGAG GATCTTCACG AGGAGGAGGC CGGCCGCCCT CCACCACATG CAACACTACA TAGACGAGGG GGGAAACCCG GCGGATCAGC ACCCAGCCGC GAGGAGCTAC GCCGCGGGGC AGCCGCCCGC CGAGGTGGAG GTAGGGAGAG AAAACATCTT CACGCTGGTG GAGAGGTACC CCCTCCTACA CCACAACCTC TCCTCCTGGG CCGCCCACAG AGACCTGCTA CAGGAGGTAA TCCACGTGCT CAGCAGGCTG GAGATCATGC TCGACTTCTC CCTACTGGCG CTGGCAGCCG CCTACGGCAC GGCGCTACAC ATACCCAACA AGCTCACCTA CTACCGCGTC GGAGGAGGCG CCTCCCACAT GCAGGGCGTA GGCGACCTCC CAAAGGTGGT CTGCACCCGA AACAAAGACG CGATAGACGC CGAAACCCTC CTCCACGCGG TAAAGGACAA AAACGTGAGG AAGGCCGTCC TCAGGAACTA CGTAGACCAC GCCAAATACG TCTACATATA CAACGCCCTC TATAAATGCG ACAAAGCGTA CAAAGTATCG ACGGCCAAAC TCCTGGCGAG GCTAATCGTT GCAAAAGCCA CAAAAGCCCA CCCAGTGAGC TGGCGGACAA TAGCGGGGAT AGCCATAGCC CCAATAGTAG GCCGCCGCAG ACTCGCCGAG AGAAGCCTCA GGAAGATGTA CGGCGCCGCC CCCTCATAG
|
Protein sequence | MGVKIKIAVV VRAYRRYSYL PQAVESALRQ TRRPDAVVVV ADDVDKLRGY PVYALETKTD KLGEAVAAGI KAAEGDVVAF LEDDDLFHPE KLQTVERIFT RRRPAALHHM QHYIDEGGNP ADQHPAARSY AAGQPPAEVE VGRENIFTLV ERYPLLHHNL SSWAAHRDLL QEVIHVLSRL EIMLDFSLLA LAAAYGTALH IPNKLTYYRV GGGASHMQGV GDLPKVVCTR NKDAIDAETL LHAVKDKNVR KAVLRNYVDH AKYVYIYNAL YKCDKAYKVS TAKLLARLIV AKATKAHPVS WRTIAGIAIA PIVGRRRLAE RSLRKMYGAA PS
|
| |