Gene Tneu_0512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0512 
Symbol 
ID6165906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp463817 
End bp464815 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content61% 
IMG OID641667665 
Productglycosyl transferase family protein 
Protein accessionYP_001793901 
Protein GI171184982 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.333543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0212154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTGA AGATAAAGAT CGCCGTTGTC GTCAGGGCAT ACAGGCGCTA CAGCTACCTT 
CCCCAAGCGG TTGAGTCCGC CCTAAGGCAG ACCAGAAGGC CAGACGCCGT TGTTGTAGTG
GCCGACGACG TCGACAAGCT AAGGGGCTAC CCCGTCTACG CGCTTGAGAC AAAGACGGAC
AAGCTGGGCG AGGCCGTAGC GGCGGGGATC AAGGCGGCCG AGGGAGACGT CGTCGCCTTC
CTAGAAGACG ACGACCTCTT CCACCCAGAG AAGCTACAGA CGGTGGAGAG GATCTTCACG
AGGAGGAGGC CGGCCGCCCT CCACCACATG CAACACTACA TAGACGAGGG GGGAAACCCG
GCGGATCAGC ACCCAGCCGC GAGGAGCTAC GCCGCGGGGC AGCCGCCCGC CGAGGTGGAG
GTAGGGAGAG AAAACATCTT CACGCTGGTG GAGAGGTACC CCCTCCTACA CCACAACCTC
TCCTCCTGGG CCGCCCACAG AGACCTGCTA CAGGAGGTAA TCCACGTGCT CAGCAGGCTG
GAGATCATGC TCGACTTCTC CCTACTGGCG CTGGCAGCCG CCTACGGCAC GGCGCTACAC
ATACCCAACA AGCTCACCTA CTACCGCGTC GGAGGAGGCG CCTCCCACAT GCAGGGCGTA
GGCGACCTCC CAAAGGTGGT CTGCACCCGA AACAAAGACG CGATAGACGC CGAAACCCTC
CTCCACGCGG TAAAGGACAA AAACGTGAGG AAGGCCGTCC TCAGGAACTA CGTAGACCAC
GCCAAATACG TCTACATATA CAACGCCCTC TATAAATGCG ACAAAGCGTA CAAAGTATCG
ACGGCCAAAC TCCTGGCGAG GCTAATCGTT GCAAAAGCCA CAAAAGCCCA CCCAGTGAGC
TGGCGGACAA TAGCGGGGAT AGCCATAGCC CCAATAGTAG GCCGCCGCAG ACTCGCCGAG
AGAAGCCTCA GGAAGATGTA CGGCGCCGCC CCCTCATAG
 
Protein sequence
MGVKIKIAVV VRAYRRYSYL PQAVESALRQ TRRPDAVVVV ADDVDKLRGY PVYALETKTD 
KLGEAVAAGI KAAEGDVVAF LEDDDLFHPE KLQTVERIFT RRRPAALHHM QHYIDEGGNP
ADQHPAARSY AAGQPPAEVE VGRENIFTLV ERYPLLHHNL SSWAAHRDLL QEVIHVLSRL
EIMLDFSLLA LAAAYGTALH IPNKLTYYRV GGGASHMQGV GDLPKVVCTR NKDAIDAETL
LHAVKDKNVR KAVLRNYVDH AKYVYIYNAL YKCDKAYKVS TAKLLARLIV AKATKAHPVS
WRTIAGIAIA PIVGRRRLAE RSLRKMYGAA PS