Gene Tneu_0510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0510 
Symbol 
ID6165823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp462208 
End bp462978 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content67% 
IMG OID641667663 
Producthypothetical protein 
Protein accessionYP_001793899 
Protein GI171184980 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.463759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0191115 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCCGG CCTGGCTATA CGCCGCCTCA GCGATCTCGG GGGCGGCAGT GGGCTTCGTC 
CTGGGGGTCA TCGGGGGCGG CGGCTCCATC CTGGCCATAC CCCTCCTCCT CTACTTCGCG
GGGCTGGCCA CGTTGACCGA CCTCAACACA GCCGTCCACC TCGCCGTCGG CTCCACGGCG
CTTGCTGTGG GCGCCAACGC CCTAGCCAAC TTCCTCATGC ACTGGCGCAG AGGCAACGTA
TCGCCGAGGG GAGCCGCCGT CTTCTCCGCC GCCGGCGTCC CAGCGGCCTG GGCAGGCGCG
TGGCTCGGCA AAGCCACCCG CGGCGAGGTC CTCCTCGCCG CCCTCGGCGC CGCCATGGTA
GCCCTCTCCA TCTGGGTCCT AAAACGCAGA GCCGCCGGAG GCCGGCAGCT AAACCTCGCT
AAGGCCGGGG CGGGAGGCGC GGCCGTCGGC TTCCTCTCCG GCTTCCTCGG AATCGGCGGA
GGCTTCCTAG TGGCGCCGGC ACTCATGTGG GCAGGCCTAG ACGTCAAGAG GGCAGTCGGC
ACCTCCCTAG CCGCGGTCGC CGCCTTCGGC TTAACCACCG CCGCCGAATA CGCCACAAGC
GGCTACCTAG ACCCCCTCAT CTCCCTAGCA TACCTCGCGG GAGGAGTGGC AGGAGGAGCA
GCAGGCGTGG CAGTAGCTGC CAAAACCCCC CGCGAAAAAA TCGCAATAGC CTACGCCGCA
GTCCTAGCCG CAGTGGGGAT ATACACAATA ATCAAGGCAC TAAAACCATA A
 
Protein sequence
MWPAWLYAAS AISGAAVGFV LGVIGGGGSI LAIPLLLYFA GLATLTDLNT AVHLAVGSTA 
LAVGANALAN FLMHWRRGNV SPRGAAVFSA AGVPAAWAGA WLGKATRGEV LLAALGAAMV
ALSIWVLKRR AAGGRQLNLA KAGAGGAAVG FLSGFLGIGG GFLVAPALMW AGLDVKRAVG
TSLAAVAAFG LTTAAEYATS GYLDPLISLA YLAGGVAGGA AGVAVAAKTP REKIAIAYAA
VLAAVGIYTI IKALKP