| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0476 |
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| Symbol | |
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| ID | 6166101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 432183 |
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| End bp | 432746 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641667633 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001793869 |
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| Protein GI | 171184950 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000424629 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000283912 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGCCGTTTA GGAGCTTCAA GAGGCTTGAG ATCCCGGACG TAATTCTCAT AGAGCCTGTG
GTCTTCCCCG ACCAGAGGGG GTTCTTCGCC GAGCTTTACA AGCGCACCGA CTTCCTGGCG
GGGGGCGTGC CCTACGACTT TGTGCAGGTG AGCGTGAGCA TGTCGCGGCG GGGGGTGGTG
AGGGGGCTCC ACTACCAGCT TAAGCCGGCT GAGCAGGGGA AGCTGGTGAC TGTCCTCAGG
GGGCGGGTCC TGGACGTGGC CGTCGACGTT AGGAGGGGGT CGCCTTGGTT TGGGAGGTAC
GTGGCGGTGG AGCTGTCTGC CGACGAGCCG AGGCTTCTGT GGATTCCGCC GGGCTTCGCC
CACGGCTTCC AGGCGCTGGA AGACGGCACC CTCTTCATGT ACCTCATGAC TAAGGAGTAC
AGCCCGCAGC ACGAGCGCTG CGTGAGGTGG GATGACCCCG AGGTGGGCAT CCCCTGGCCC
ATAGGAGACG CAATCCTCAG CGAGAAGGAC CGGAGGTGCC CGCCGCTTAG GGAGGCAGAG
ACCAACTTCG AATACCCCAT ATGA
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| Protein sequence | MPFRSFKRLE IPDVILIEPV VFPDQRGFFA ELYKRTDFLA GGVPYDFVQV SVSMSRRGVV
RGLHYQLKPA EQGKLVTVLR GRVLDVAVDV RRGSPWFGRY VAVELSADEP RLLWIPPGFA
HGFQALEDGT LFMYLMTKEY SPQHERCVRW DDPEVGIPWP IGDAILSEKD RRCPPLREAE
TNFEYPI
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