Gene Tneu_0462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0462 
Symbol 
ID6166075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp417462 
End bp418628 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content64% 
IMG OID641667619 
Productglycosyl transferase family protein 
Protein accessionYP_001793855 
Protein GI171184936 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.215189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000773119 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGTTTTC GGCACGACGT GTGTATAACC GTTGTGCTTC CAGTTTTAAA CGAGGCCGAG 
GCCCTCCCCC GGGTAGTTGA GGAGCTTAGG GCGGCGGGGT TCAGCAACAT CTTGGTGGTA
GACGGCGGCT CCACAGACGG TAGCGTCGAG GTGGCGAAGA GGCTTGGCGT TAGAGTGGTC
CCCCAGATGG GCAGGGGGAA GGGGATGGCC GTGAGGACGG CCCTCATGTA CGTCGACACC
CCCTACGTGG CTTTTCTAGA CGCCGATTAT ACATATCCGG CTGAGGACCT CAAAAAGCTG
TTGCCCCTCC TCCGCCACTA CGACGTCGTC CTCGGCGCTA GAAGGGGCGA GATGCCCCTT
GTGTACAAGC TGGGCAACGG GGCCTTGGGC TGGCTCTTCA GGCTTCTCTT CGGCGTAGAC
ATAAGGGACC CCCTCACTGG GATGTACGCC GCCAAGACGG AGGTGCTTAG AGACGCCGCT
CTCGAGGCCA GGGGCTTCGA CCTAGAGGTT GACCTCCTCG CGAAGGCTCT GGCGGCCGGG
GCTAGGGTGG CCGAGGTGGA GATCGGGTAC AGGAGGAGGG TCGGAAAGAA GAAGCTGAGG
CCTTGGCACG GCCTATCCAT CGCGTTGAAG TCCCTCTCGC TTGCATACCG CCTCAACCCC
ACCCTTTCCC TATCCCTCCT CGGCGCGCTT CTCCTCGTGC CTGGCGTCGC GCTGGGGTCG
TGGGTGGCGT ATAGGTTCTT CTACCAAGGC GTCCCCCACT ACATGCTGGG CCTCCTCTCC
CTGATCCTGT TGATGCTCGG CGCCCTATCT GTGGCGTTGC TCCCGCTGGC CACGGCGGTG
TTGAGGCTTC AAGCCGCCGT GAGGAGGAGG GATCTACGCC TCCCCACCGA CTGCCTCCCT
CCCATGCCCG AGCCAGCGCC GCCGGCGGCG CCGGCCTCGG CTGAGGGGAG CGAGGCGGAG
ACGCCGCTTC TCCACGTGGG GAGGGGGCTT GTCTTGTCCT TCATGGCGCT TCTAGCCGTA
GCGGCGTACT ACCTGGGGGT CGGCGACGCC GCAACAGCTA ACAAGCTGGC CGAGTGGGCC
TACTACGCCT TGGCGGGCGC CGTCGTTGCG CTACTCGTCG ACGCCGCGGT GGTCAGCCGC
CGTGGACAGC GAGGAAGTCA GACATAG
 
Protein sequence
MSFRHDVCIT VVLPVLNEAE ALPRVVEELR AAGFSNILVV DGGSTDGSVE VAKRLGVRVV 
PQMGRGKGMA VRTALMYVDT PYVAFLDADY TYPAEDLKKL LPLLRHYDVV LGARRGEMPL
VYKLGNGALG WLFRLLFGVD IRDPLTGMYA AKTEVLRDAA LEARGFDLEV DLLAKALAAG
ARVAEVEIGY RRRVGKKKLR PWHGLSIALK SLSLAYRLNP TLSLSLLGAL LLVPGVALGS
WVAYRFFYQG VPHYMLGLLS LILLMLGALS VALLPLATAV LRLQAAVRRR DLRLPTDCLP
PMPEPAPPAA PASAEGSEAE TPLLHVGRGL VLSFMALLAV AAYYLGVGDA ATANKLAEWA
YYALAGAVVA LLVDAAVVSR RGQRGSQT