Gene Tneu_0456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0456 
Symbol 
ID6165998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp411146 
End bp412441 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content61% 
IMG OID641667613 
Productglutamine synthetase catalytic region 
Protein accessionYP_001793849 
Protein GI171184930 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000119779 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGGTGG AAGGGATTGA CGTCTGGAGG GTGCTAAAAG GCGCTGGGGT GAAATACGTC 
TACTTCGTGA TAGTGGACAT CTACGGGAGG CCGCGCGTAG ACATAATGCC GATCGACATG
GCCAAAGACG CGTTTATCGA CGGCGTTCCC TACGACGGCT CCTCCATCCC CGCCTACAGC
ACCGTCAACA GAAGCGACTT CGTGGCGGTG GTTGACCCAT CCGCCGTCTA TGTGGAGAGC
TGGAACGGCG GGAAGGCCGC CTACGTCTTC ACCAACACCC TCGACGGCAA CGCGCCATCT
CCACTGGACC CACGTAACGT GCTTAAGCAG GTCCTCGAGA GGGCGGAGAA ACGCGGCTAC
CAGTTCAAAA TCGGCGTGGA GGTGGAGTAC TTCGTCGTCA GGGGCAACCC GCCGGAGTTG
CCCGAGAAGG CTGGCTACTT CGACGTGCCG CCTGACGCGA CGAGGAAGGT GGTGGAGGAG
ATCATGGAGA ACTTCGCCGC GGCGGGCCTC GGCGAGACCA AGACGCACCA CGAGGTGGCG
CCGTCCCAGT TCGAGGTAAA TATCCCATAC GGCAACCCGC TGAAGACGGC GGACTCCATA
CTGATGTTTA AGACCATGGC CAGGGCCGTG GCGGCTAAAC ACGGCTACAC GGTGACGTTT
ATGCCCAAGC CCTTCTGGGG CATGAACGGA AGCGGCGCCC ACACCCACAT ATCTGTGTGG
AAGGACGGCA AGAACCTGAT GGCCTCCGTG AAGGAGCCCA CCCAGGAGCT CAAGTGGGTG
GTGGGCGGCA TATTGAACAA CGCCATATCT ATATCCGCGA TCGTGGCGCC CACCGTCAAC
TCCTACAAAC GCCTAGTGCC TCACCACGAA GCGCCCACCC GCGTCGTGTG GGGCCTCGGC
AACCGCTCCG CCATGGTACG CGTGCCATAC TACGGCGGGA AGATAAACAG GATTGAGTAC
AGACACCCAG ATCCCTCCAT GAACCCCTAC CTGGCCTTCG CCGCCGTGGT GCTGGCTGGG
CTGGAAGGCC TAGAGAACAG GATAGAGCCG CCGCCCCCGG TCCAGGAGGT GGCCTACGAC
CTCCAGGGCG TTAGGGAGAC GCCGCCTAAC CTCGGCGCCG CGCTGAAGTA CATGGAGGAG
GGCAAAATCG CGAGGGAGCT ACCAAGCGAC TTCGTGAAGG CGTACCTCGG CGTGAAGCAG
GCCGAGTGGC AGAGCTACGC CCAGCAGTAC CAGTGGGAGA AGACCTGGAA CACCATCACG
CCCTGGGAGT ACGAGCAGTA TCTAACCACC GTCTAA
 
Protein sequence
MQVEGIDVWR VLKGAGVKYV YFVIVDIYGR PRVDIMPIDM AKDAFIDGVP YDGSSIPAYS 
TVNRSDFVAV VDPSAVYVES WNGGKAAYVF TNTLDGNAPS PLDPRNVLKQ VLERAEKRGY
QFKIGVEVEY FVVRGNPPEL PEKAGYFDVP PDATRKVVEE IMENFAAAGL GETKTHHEVA
PSQFEVNIPY GNPLKTADSI LMFKTMARAV AAKHGYTVTF MPKPFWGMNG SGAHTHISVW
KDGKNLMASV KEPTQELKWV VGGILNNAIS ISAIVAPTVN SYKRLVPHHE APTRVVWGLG
NRSAMVRVPY YGGKINRIEY RHPDPSMNPY LAFAAVVLAG LEGLENRIEP PPPVQEVAYD
LQGVRETPPN LGAALKYMEE GKIARELPSD FVKAYLGVKQ AEWQSYAQQY QWEKTWNTIT
PWEYEQYLTT V