| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0448 |
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| Symbol | |
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| ID | 6166022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 405096 |
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| End bp | 406862 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641667605 |
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| Product | carbon starvation protein CstA |
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| Protein accession | YP_001793841 |
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| Protein GI | 171184922 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000722986 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00131941 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTAACA CCCCCGCACC ATACATACTC CTGGGCCTCG TGCTCTATTT TTTGACATAC
CGCTTCTACG CCAGGTGGGT AGATAAGAAG ATTTGGGAGA CCGACCCCAA CAGACCCACC
CCGGCGAGGC TCTACTTCGA CGGCGTTGAG TTCTTCCCCG TCTCTAAATA CGTCCTCTTC
GGCTACCAGT TCAAGTCCGT AGCCGCGCTC GGCCCCATAG TTGGACCTGT CGTAGCTACT
CTGTTTTTTG GCTGGGCGCC GGCGCTCTTG TGGGTTATAT TTGGTAATAT GTTCATCGGC
TGGGTTCAGG ACTACTCAGC AATGATGATG TCGATTAGAA GCGAGGGGAG GTCAATGGGC
CCCATCACCT ACAAGCTACT GGGAGATAAG GCGAGAAAGA TCCTACTCAT CTATATAATA
TTCTACCTCA TTATCATTAC TGCCGTATTT GAGTGGACGA TCGTAGACGT GTTCAACCGT
GTGCCGGGCA CTTTTACAGC GGTATTGTTT GTACTAGCAG GTGGTGTGGT TTTCGGATTG
TTGATTTTTA GGATGAGACT CGATGTTTTA TTGGCTACGT TGGTTGCTTT AGCTATTGTC
CTAGTTGGAT ATTTCACGGT GGTGCTTTTG CCTTATGCTA GACAGCCTGG GACTAACTTC
CTTGATAGCT CTGAGTTTTT TGTTTCACAT AATTTCGACA AGAGGTTAAC CTATCCAGGC
ACTTTTACAG TTCTCTTTTG GCTAATAGTT GTATCAATCC TCTATTATAT ATCATCTATT
ACCCCAATGC CACGGTTTTT ACTTCCGACA GTCTATGTTG GGTATTTGCC TTCAATAATC
GCACTTGTAT TAGTTCTAAT AGCGGCGGTA TTTACTCCTA TAAGTGGATT AGCTATTCAA
CAACCTGCGA TGAAGGAGTT CTACGTCGAT CCTCTGAAGG ATCCCCGCGG CGGTCCGCTT
TGGCCTATTC TCTTTGTGAC AATAGCCTGC GGCGCTATAT CGGGCTGGCA TAGTCTCGTC
TCCTCCGGCT TAACCTCTAA GCAACTGGAG TATGAGACAG ATGCCTTACC GGTGGGGGGA
GGCGCCATGA TGACTGAGGG AGCGGTAGCG CTTTCTTCCA TAGCATCTGT TATGGTGTTG
GAGCGTGTAA CTGGGACAGC GGCAGACTAT GTGCAAGGCG CGACTTTGCT CACAACCTCT
CTGTACAGGA TTCCAGCAGT TTATATGAGT ATCCTGTATG GGATTTTCGT CGCCGTTATG
GGGCTTATTA CATCTATGCT ATTTGTGAGG GTATTCAGAC TTGTTATGGC TGAGCTGTTT
GAAGATACAC CGCTTGGCAA CAAACATATT TCTACATTAC TAATAATCAT ACTATCTGGG
TTTTTGGCGT TTGTAGGTAG CTGGACTAAT CTGTGGGTGT TCTTTGGAGG CACAAACCAA
CTGTTGGCTG CTCTTGCGCT ACTTCTAGTC GCTATTTTCC TGGCAAGTAT AAAGAAGCCA
AATGCGTACG TCTTCATCCC GGGAATTTTC ATGACGGTAA CTACGCTTGC TGCATTAGCG
TGGGAGACCT ATGTCTACGG TCTCTACGGA GTTTTAAACA CGCCAATGCC AGTGCAGAAG
TCCGTAGCTG TACTTTACGG CAATACGCTA GTTCAAGTCG CAAATATTCT GTCAGCGGCC
TTCGGTGCCT TATTGCTTGT ACTTGGAGTG CTGATGAGCT ATTATCTACT AGCCGGCTGG
GCCAAGTATC GGAGGGGTCA AAAATAA
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| Protein sequence | MFNTPAPYIL LGLVLYFLTY RFYARWVDKK IWETDPNRPT PARLYFDGVE FFPVSKYVLF
GYQFKSVAAL GPIVGPVVAT LFFGWAPALL WVIFGNMFIG WVQDYSAMMM SIRSEGRSMG
PITYKLLGDK ARKILLIYII FYLIIITAVF EWTIVDVFNR VPGTFTAVLF VLAGGVVFGL
LIFRMRLDVL LATLVALAIV LVGYFTVVLL PYARQPGTNF LDSSEFFVSH NFDKRLTYPG
TFTVLFWLIV VSILYYISSI TPMPRFLLPT VYVGYLPSII ALVLVLIAAV FTPISGLAIQ
QPAMKEFYVD PLKDPRGGPL WPILFVTIAC GAISGWHSLV SSGLTSKQLE YETDALPVGG
GAMMTEGAVA LSSIASVMVL ERVTGTAADY VQGATLLTTS LYRIPAVYMS ILYGIFVAVM
GLITSMLFVR VFRLVMAELF EDTPLGNKHI STLLIIILSG FLAFVGSWTN LWVFFGGTNQ
LLAALALLLV AIFLASIKKP NAYVFIPGIF MTVTTLAALA WETYVYGLYG VLNTPMPVQK
SVAVLYGNTL VQVANILSAA FGALLLVLGV LMSYYLLAGW AKYRRGQK
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