Gene Tneu_0429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0429 
Symbol 
ID6166162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp387433 
End bp388821 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content55% 
IMG OID641667587 
ProductDNA-cytosine methyltransferase 
Protein accessionYP_001793823 
Protein GI171184904 
COG category[L] Replication, recombination and repair 
COG ID[COG0270] Site-specific DNA methylase 
TIGRFAM ID[TIGR00675] DNA-methyltransferase (dcm) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.584191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0384106 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGT ATACGGTAGT GTCGCTGTTT TCTGGGGCAG GTGGTCTAGA CCTAGGCTTT 
GTCCAGTCAG GCAGGTACAG GATGTTGTTT GCGAATGACG TACTCTCATC TGCGCTCACA
ACCTACGCAA AAAACCTCGA TTTGAAGCTG GAGCTGTGCT CATCTCGGCG GACAGAAGCG
CGGCCAGGTG TAGCCCTGGT GTGCGATGTG GCTGAAGTGG ACTTCGCCCC CCTTGGCGAT
GTGGATGTCA TTGTTGGAGG GCCGCCCTGT CAGGACTTTT CTATAGTGAG GGGGCCATCC
TGGGATAGGA GGGGGATTGA GGTTAGGAGG GGAAGGCTCT ACGCTCACTT CGTGAGGGCG
CTGGCTACGC TCAGGCCTAA GGCCTTTGTA TTTGAAAATG TTCCAGGTCT CATCAGCACC
AACGGTGGTC TTGCCTACAA GGTCATCCTC GACGATTTTT CAAACTTGAA GCTCCGCTGG
GAAGAAGTTA GAAAGGTAGC CGGCGCGGAC GGAACCGGCG TCAAGCCAGA GGGCTACGAG
ATAGTCTTCG CTGACGTTGT AGATTTTGCA AAGCTGGGCG TTCCACAGAG GCGAGAAAGG
CTGATTATCG CAGGACTCAG GAGGGATATC GTAAAGAACA GAGACGTCTG GGACATAAGA
GCGAAGTTTA GCAGAGCTGT GCACGGCGGA GGGCTTCTCT TCTTTAAGTA CCCGCTGACA
GCGATCGAAG CCTTTGAAGG ATCTACGCTT GAGAATCTCG GCGATGTCTA CAGAGAAGTA
ATGAGGGAGT GGGAAGGCGT GTGGAAGGAG GTAGGCACAC CGCGGGCTTA CGAATGGAAG
GAAAGGGAGT GGGACAGGCT TACCTTTGAT ATAGTGAAGG ACTATCTGAC CGTCAGCGGG
ATAAGAGACG CGTCCGACTT CGACGAAGCC ATGGAGCAAC ACAAGAGGGT GCTCACAGAG
CTTGGATACT ACGGCGTGCC GGTGTCGAGC CTTAAGCTCC AGGACGGAAC CACCGAAGAG
CCGAGCGAGG ATCCGCGCGT CATTGAAAGG ATGAGGATGA TACCGCCTGG AGAAAACCAC
GAATTCGTGC GAGGCACAAA GTGGGAAGTG GAGGGCAGAG GCATCAGCCT AGTCTACAGG
AGGCTCCACC CACTAAAGCC TTCATACACG ATAGTGGCCT ACGGTGGGGG AGGCACCCAC
GGCTACCACT ACCGGCGCAA CCGCGCCACC TTGACGCTCA GAGAGCGGGC GAGACTTCAG
ACCTTCCCCG ATACTTTCCT CTTCTACGGC AAAAGGAGCG AAATTAGGGC ACAGATTGGC
GAGGCCGTGC CGCCCTTAGC CGGGAAAAAG ATAGCACAAG CCCTAGCCGA AGTGCTCGAC
ATGCTTTAA
 
Protein sequence
MKTYTVVSLF SGAGGLDLGF VQSGRYRMLF ANDVLSSALT TYAKNLDLKL ELCSSRRTEA 
RPGVALVCDV AEVDFAPLGD VDVIVGGPPC QDFSIVRGPS WDRRGIEVRR GRLYAHFVRA
LATLRPKAFV FENVPGLIST NGGLAYKVIL DDFSNLKLRW EEVRKVAGAD GTGVKPEGYE
IVFADVVDFA KLGVPQRRER LIIAGLRRDI VKNRDVWDIR AKFSRAVHGG GLLFFKYPLT
AIEAFEGSTL ENLGDVYREV MREWEGVWKE VGTPRAYEWK EREWDRLTFD IVKDYLTVSG
IRDASDFDEA MEQHKRVLTE LGYYGVPVSS LKLQDGTTEE PSEDPRVIER MRMIPPGENH
EFVRGTKWEV EGRGISLVYR RLHPLKPSYT IVAYGGGGTH GYHYRRNRAT LTLRERARLQ
TFPDTFLFYG KRSEIRAQIG EAVPPLAGKK IAQALAEVLD ML