Gene Tneu_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0425 
Symbol 
ID6166245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp384711 
End bp386039 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content67% 
IMG OID641667583 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001793819 
Protein GI171184900 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0797727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.039111 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACAG TGGTAGTGGT GGGGGGCGGC ACTGCCGGGG CGACTGCCGC TTCCAGGGCC 
AAGAGGCTGT GCCCCCAGTG CAGGGTGGTG CTGGTGGAGG CCTCTAGGTA CATAACCCAC
GCCCCCTGCG CCATCCCCTA CGCCATCGGG GGCTTCGCCC AGGGGGAGAT CTGGCTATAC
AGCGAGGAGG AGTTCGAGAG CGAGAGGGGG GTGGAGGTGT ATACGGAGAC CCGGGCCGTG
GACGTGGCGG GGGACAAGGT GTTTCTGGAG GGGAAGCTGG GGGGCTCCCT CAGATTCGAC
GTCTTGGTGG TGGCCGTGGG GGCTAGGCCG GCGGTGCCCA AGGTGGAGGG GGTGGAGCTG
GAGGGGGTTC TGCCGGTGAG GGGGGTGGAG GTGGTGGATA AGGCGAAGAG GCTCCTCCAG
GGGGCTAGAG ACGTGGCGGT GGTTGGGGCG GGCTACATCG GGGTGGAGAT GGCCGACGTC
TTGGCCCAGA TGGGCAAAAG GGTGGTGCTC ATAGACGGGA GCCCCAGGCC TCTGGCCAAG
TCGCTTGACC CGGACATGTC CGCGGTGGTG GCTCGGTACA TGGGGGAGAG GGTGGAGCTG
AGGCTGGGGG AGAGGCTTGT GAGAATCGGG GGTGAGGGGG GCAGGGCTAG GTATGTGGAG
ACCGACGGGG GCCGCTACCC CGCCGACGTT GTGTTCCTCG CCACGGGGGT GAGGCCCAAC
GTCGACCTCG CCCTGAAGGC CGGCGCGAGG CTGGGCCAGA CGGGGGCTGT GGAGGTGAAC
GAGTACATGG AGACGGCGGC GCCCGCCGTC TATGCCGCAG GCGACGTGGC CGAGGCGAGG
CATGCGGTGA CGGGGGAGCC CGTGTGGATA CCGCTGGCCA TCTACGCCAA CAAGATGGGG
TGCGTCGCTG GGACAAACGC CGGTCTGGGG AGGAGGGCCA TCTCCTTCCC GCCGGTGGCC
GGCGCCTCGG TGACCAAGTT CCTCGACATG TACATTGGAT CCACCGGGCT CACCGAGGAG
GAGGCGAGGA GGAGGGGCAT CTACGGCAAC TCCATCTCCA TCTCCGCGAC GGACAAAGCG
AGGTATATGA AGGGCGCCGT AGACGTAACC CTAAAGGCGG TGGTGGATAG GGAGGGCAGG
CTGGTGGGGA TGCAGATCGT GGGCCGGACC CCCTCGGTGG GCGGCCTGGT GGACCTGGCC
ACCCAGTTCC TGGGGAGGCC CGTGGAGGAT ATGTTCAAGG CCGAGTACTC ATACATGCCC
TTCACCGCCT CGCCCTGGCA TCCCTTCACC ATAATCGCAA GGCTCTACCT CAGGGAGAGG
CTTAGGTAG
 
Protein sequence
MKTVVVVGGG TAGATAASRA KRLCPQCRVV LVEASRYITH APCAIPYAIG GFAQGEIWLY 
SEEEFESERG VEVYTETRAV DVAGDKVFLE GKLGGSLRFD VLVVAVGARP AVPKVEGVEL
EGVLPVRGVE VVDKAKRLLQ GARDVAVVGA GYIGVEMADV LAQMGKRVVL IDGSPRPLAK
SLDPDMSAVV ARYMGERVEL RLGERLVRIG GEGGRARYVE TDGGRYPADV VFLATGVRPN
VDLALKAGAR LGQTGAVEVN EYMETAAPAV YAAGDVAEAR HAVTGEPVWI PLAIYANKMG
CVAGTNAGLG RRAISFPPVA GASVTKFLDM YIGSTGLTEE EARRRGIYGN SISISATDKA
RYMKGAVDVT LKAVVDREGR LVGMQIVGRT PSVGGLVDLA TQFLGRPVED MFKAEYSYMP
FTASPWHPFT IIARLYLRER LR