| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0423 |
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| Symbol | sdhA |
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| ID | 6166223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 382639 |
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| End bp | 384366 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641667581 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001793817 |
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| Protein GI | 171184898 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.102696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0264935 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTAC TTACATATGA CGTGGTGGTG GTGGGCAGCG GCCTTGCCGG CTTGAGGGCC
GCGGTGGCCG CCGCCGCCCG GGGGGCCTCG GTGGCCGTTG TCACCAAGAC CTCGGGCCCC
CGGTCCCACA GCATCTCCGC CGAGGGGGGG ATGGCCGCGG TGGTGCACCC GGAGAAGACC
GGCGACAGCC CGGAGCTCCA CGCCTACGAC ACAGTGAAGG GCGGGGACTT CCTGGTGGAT
CAGGAGGCGG CTATGGTTCT GGCGAGGGAG GCCCCCGCCG AGGTTAAGTT CCTGGACTCC
ATCGGGGTTC CCTGGAGCAG AGACCCCGAC GGCAGCTACA GCTTGAGGAT GTTCGGCGGT
ATGTCTAAGC CTAGGACTGT GTTTGCCAAG GACAAGACGG GGTTCTACAT AATGAGCGCG
CTGTATAGAC ACGCCCGGTC CTTCCACAAC ATCCACTTCT ACGAGGAGCA CATCGTCACG
AGGCTGGTGG TGAAAAACGA CGTCTTCTAC GGCCTGGTGG CGCTGGACAT GAGGAGGGGG
GAGCTGGTGG GGTTCGTGGC CAAGGCTGGG GTCATCGCGG CGGGGGGCGC GGGGAGGCTC
TACCGTATGA CCACCATGGG GTGGCTAAAC ACGGGCGAGG TTCTGGGCTA CGCGCTTAAG
GCGGGCGCGG CGCTGAGGGA TATGGAGTTC GTCCAGTGGC ACCCAACGGC GCTGGTCCCA
AGCGGCATAC TGATCAGCGA GGCCGCCAGG GCCGAGGGGG GCTACCTCGT CAATAGACAC
GGCGAGAGGT TCATGAAGAG GTACGCCCCC GAGAAGATGG AGCTGGCGCC GAGGGACGTG
GTGTCTAGGG CGATAATCAC CGAGTGTATG GAGGGCAGGG GGTTCCTCCA CGACTCGGGC
CTCTGCTACG TGGGCCTCGA CGTTAGGCAC ATAGACAGGA AGAGGCTGGA GGAGAGGCTA
CCCCTCCTCC TGGAGCTCTC CAAGACCTAC GCCGGGGTTG ACCCAACCAC GGAGCTGATC
CCCGTGAGGC CGGCCGTCCA CTACTTCATG GGGGGCATAT ATACGGACGT CCGGGGGAGG
GTGCTGAACC ACAGGGGTGA GTGGATCCGG GGGCTCTGGG CGGCTGGGGA AGCCGCCTCC
ACCGGCGTAC ACGGGGCCAA CAGGCTGGGC TCCAACTCCC TGTCTGAGTG CGCCGTCTGG
GGGAGGATCG CGGGGGAGGA GGCCGCGGCC TACGCGGCTG AGAGACCCGC CCCGGGGGCC
ACCGCCGTGA GGCTGGAGAT GCAGAAGGAG GAGGAGCACA TCGCGAGGCT GTCTAAGAAC
GAGCGCGGCG GCGAGAGCCC CCCCAGCCTG AGGAAGAAGC TTCAGGACAT CATGGAGAGG
GGGGCCGGCA TAGTTAGACA CGGCAGCGCG GCGTCTGAGG CCATGCAGAA GCTCAACCGG
CTCTTCAACG CGCTGGAGGA GATGAGGATT ACGGACGGGG GGAGGGTTTA CAACATGGAG
CTGAGGGAGG CGCTTGAGCT GGAGGGGATG CTCTACGCAG CCCAGGCCGT TTTGACGGGC
GCCCTGCTGA GGCAGGAGTC AAGGGGGGCG CACTACCGGC TGGATTTCCC GAGGCGGGAC
GACGGGTGGC TTGTCCACAC GGTGTACTAC CTCTACGGCG GCGCTATGCA CGTCTCAACG
GCGAAGGTGG AGGTCACCAG GTGGATGCCC GAGGCTAGGA GGTACTGA
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| Protein sequence | MDLLTYDVVV VGSGLAGLRA AVAAAARGAS VAVVTKTSGP RSHSISAEGG MAAVVHPEKT
GDSPELHAYD TVKGGDFLVD QEAAMVLARE APAEVKFLDS IGVPWSRDPD GSYSLRMFGG
MSKPRTVFAK DKTGFYIMSA LYRHARSFHN IHFYEEHIVT RLVVKNDVFY GLVALDMRRG
ELVGFVAKAG VIAAGGAGRL YRMTTMGWLN TGEVLGYALK AGAALRDMEF VQWHPTALVP
SGILISEAAR AEGGYLVNRH GERFMKRYAP EKMELAPRDV VSRAIITECM EGRGFLHDSG
LCYVGLDVRH IDRKRLEERL PLLLELSKTY AGVDPTTELI PVRPAVHYFM GGIYTDVRGR
VLNHRGEWIR GLWAAGEAAS TGVHGANRLG SNSLSECAVW GRIAGEEAAA YAAERPAPGA
TAVRLEMQKE EEHIARLSKN ERGGESPPSL RKKLQDIMER GAGIVRHGSA ASEAMQKLNR
LFNALEEMRI TDGGRVYNME LREALELEGM LYAAQAVLTG ALLRQESRGA HYRLDFPRRD
DGWLVHTVYY LYGGAMHVST AKVEVTRWMP EARRY
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