Gene Tneu_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0417 
Symbol 
ID6166121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp374508 
End bp374927 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content61% 
IMG OID641667575 
Productsignal transduction protein 
Protein accessionYP_001793811 
Protein GI171184892 
COG category[K] Transcription 
COG ID[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.694858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0742839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGG TGGGGAACTA CATAAGGCGG GAGCCTATCA CGGTTCCCCC GGGCGCCACG 
CTGAGGGAGG CCGTCAAAAT TATGGCGCAA TACAACGTCG GCCTTGTGGT GATAGCAGAT
CAAGCGAGGA GGCCCGTGGG GGTACTATCT GAGCGCGACA TCATAAGGGC TGTGGCCGCC
GGCAGAACGC TAGACGCCAA GGTGGAGGAG GTGGGCACCG TGGGCAACAT CCTAACGGTC
AAGAAAGACG AGGACATCTA CACGGCTATC AAGGCCATGC GCAGCCGCGG CGTGCGCCAC
GTAGTGGTGG TAAACGAAGA CGGGACGGTG GCCGGCGTCC TCTCCATCAG AGATCTGGTA
GAAGACCGGG CGCTGAAGAC GCTTGGAGAT AGGGCATGGT GGCCGCCGCC AGAAGAGTAG
 
Protein sequence
MDKVGNYIRR EPITVPPGAT LREAVKIMAQ YNVGLVVIAD QARRPVGVLS ERDIIRAVAA 
GRTLDAKVEE VGTVGNILTV KKDEDIYTAI KAMRSRGVRH VVVVNEDGTV AGVLSIRDLV
EDRALKTLGD RAWWPPPEE