| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0407 |
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| Symbol | |
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| ID | 6166157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 368542 |
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| End bp | 370458 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641667565 |
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| Product | nickel-dependent hydrogenase large subunit |
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| Protein accession | YP_001793801 |
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| Protein GI | 171184882 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.781594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0807519 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACGG TAAAGATCTG GATTGACCCC ATTACGCGTA TTGAGGGACA TCTAGCTTTA
TACGCCGAGA TAAACTCGGC CAGCAGAGCT GTGCAGACGG CTAGAACTAC CGTCATGATG
TTCCGCGGGT TCGAGGTCTT CCTAAGGGGG AGGCCACCCG AGGACGCTCC CCACATAGTT
TCTCGTACAT GTGGCGTCTG CGGCGCGGCC CACGCCAACG CGTCTGTGAG GGCATGCGAC
GTAGCCGCCG GAATGACGCC GTATCCCATG GGAAACGTGT TGAGGACTCT GGCCTACGCC
ATGACCGACT ACACCTACGA CCACCCGCTG ATTTTGAACA TGTTGGAGGG GCCGGACTAC
AGCGAGGCTA TCGTCAGCAA GCTGACGCCG TCGGTGTGGA AGATCGCCCA GGAGACGCCG
GCTCAGTACT CCGCCATTCA CGGATACCGG ACGATTGCAG ATATCATGAA GGATCTGAAC
CCCATCACCG GCAGGATATG GCAGTTGACT GTGAAGTACC AGAGGATCGC GAGGGAGGCC
GGCGTCTTGA TCTACGGCAG ACACTCCCAC CCGTCTACGT TGATTCCGGC GGGCATTTCG
ACGGACATCT CCAATCTGCC GTCTCTCATC CAGGAGTACT ATGCGAGGCT TTCGCAACTT
ACCGCCTGGG TTAAGTTCGT CTGGGCTATC TGGCAGGACC TCTACGAGTT CTACCGCGAC
CACGTAACTA CGCCGGATGG TAAGCCCTAC GCCACTACCC AAGGCAAGAC CCACGACCCG
CCGGTGATGC TCGCCGGCGG TTTTGCAGAC GACCCCGAGG TGTACAGCAA CATAACCGAC
GAGGCGAAGG GCGACTGGAG GGAGCTCTAC GCGAGGCTTG ACCAGGCCTA CAACGCGAGG
GGGGAGAAGC CGGGCTTCGC CATCGGCCAC GATATATACA GCAAGAACCC GACGGAGATC
CAGCTCGGCT ATGTGGAGTT CGCCGACTCT TCCTTCTACG AGGACTGGGT GAAGAGCAAC
GTGGCGCCGC CCACCGGCTG GATAAAGGAG GACCCCATCG GCCGGCCGTT GGTAAATGGA
ACAGAGCTCT TCAAGTACCA CATGTGGAAT AGGACCACTA TCCCGAAGCC CGGCGCCATC
AACTTCGCTG AGAAGTATAG CTGGGCGGCT GAGCCTAGGC TTGTGCTTAA GGACGGCCGC
ATCGCGCCTA TTGAGACCGG CCCCATCTCG CAACTGTGGC TTGACACGCT ACACGCCACG
AAGTTTGAGC TGGCCGGCTT CAAGGCCTGG GAGTCCAACG GTAGCCAGAT GAAGATCTAT
CTCCCCGGCG GGACCGAGGC GCCCGACCTG CCGCCCGGCA CCAAGGACGA GCTCGTCATT
ACGTGGAATC TGCCCAAGTA CTCAACGACG TTTGAACGTC TGCTGGCCCG CGCGGTTCAC
CTCGCCGTGG TGAACGCCAT CGCTTGGGCC AACCTGCTGT ATAGCCTACA GCTGGTGAAC
GCCGGCAAGA TACAGACCTC TAGGCCGTGG AGCTACGGCA AGTGGCCCGA CTTCAGCTAC
AGCTTCGGCT GGTGGCAGGT GCCGCGTGGC AACTGTATGC ACTGGCTCGT GCAGAAGGGC
GGGAGGATCG TGAACTACCA GTACGAGGCT CCGACGACGC CTAACGTCAG CCCGTCTAAT
AACCGCTGTA CTGACCCGTG GAAGGGCCAG TGCGCCGGGC CCTTCGAGAT GTCTGTAAGG
AACAGCGTGG TGACGGAGGA GCTTCCGCCT GACCAGTGGA CTGGCCTCGA CCAGGTGAGG
GCAATCAGGA GCTTCGACCC ATGTCTCGCC TGTGCGGTGC ACTTCGAGGC CAAGGGCGAA
GGGGGCAGAG TTATGAACGT GATTGAGAAG GTGATCTGGA ATGCCTGCGC CATTTAA
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| Protein sequence | MSTVKIWIDP ITRIEGHLAL YAEINSASRA VQTARTTVMM FRGFEVFLRG RPPEDAPHIV
SRTCGVCGAA HANASVRACD VAAGMTPYPM GNVLRTLAYA MTDYTYDHPL ILNMLEGPDY
SEAIVSKLTP SVWKIAQETP AQYSAIHGYR TIADIMKDLN PITGRIWQLT VKYQRIAREA
GVLIYGRHSH PSTLIPAGIS TDISNLPSLI QEYYARLSQL TAWVKFVWAI WQDLYEFYRD
HVTTPDGKPY ATTQGKTHDP PVMLAGGFAD DPEVYSNITD EAKGDWRELY ARLDQAYNAR
GEKPGFAIGH DIYSKNPTEI QLGYVEFADS SFYEDWVKSN VAPPTGWIKE DPIGRPLVNG
TELFKYHMWN RTTIPKPGAI NFAEKYSWAA EPRLVLKDGR IAPIETGPIS QLWLDTLHAT
KFELAGFKAW ESNGSQMKIY LPGGTEAPDL PPGTKDELVI TWNLPKYSTT FERLLARAVH
LAVVNAIAWA NLLYSLQLVN AGKIQTSRPW SYGKWPDFSY SFGWWQVPRG NCMHWLVQKG
GRIVNYQYEA PTTPNVSPSN NRCTDPWKGQ CAGPFEMSVR NSVVTEELPP DQWTGLDQVR
AIRSFDPCLA CAVHFEAKGE GGRVMNVIEK VIWNACAI
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