Gene Tneu_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0400 
Symbol 
ID6164863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp362318 
End bp362890 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content66% 
IMG OID641667558 
Productbeta-lactamase fold-like Zn-dependent hydrolase 
Protein accessionYP_001793794 
Protein GI171184875 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.564256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGGC TGCTGTTTAG GGGGGTGGCG GTGGTGCGGC GGGACTACGC CGGGGTTGAG 
ATATCGGCGG GCGGCGACTC GCTCTGTATA GACGTGTTGA AGCCCGCCTG CAGACACGTC
CTCTACACCC ACCTCCACCC GAGGCACTAC GGCGGCGCCG GCGGCCTGGC GCCCCCCGCG
GTAAAGCCGG GGGATAGGCT TGAGCTGGGG CCCTTCGCCG TGTCCGTAGT GGAGGCGTAC
AACGTCACGA AGCTGGTGGG CGGCGCCCCG GCGCATCCCA AGGGGACGGG CGTGGGGTAC
CTAGTGGAGG CGGACGGCGT ATCGCTGTAC CACCCGGGGG ACACCGACCT CATCGGGGAG
ATGGCGAAGA TTAGGGCAGA CGTCTTCCTG GCGCCCATCG GCGGAGACGG CACCATGACG
GCGGAGGAGG CCGCCGAGGC TGTCAAACTC ATTCGTCCAA AGATCGCGGT GCCTATCCAC
TTCGAGGGGG CGCGGCCCTA CATCAAGTTT AGAGACATCT CCCAGCCCTA CACGCAGGTG
GTGCATCTGG AGACCTCCCC CTCAAGCTTT TAA
 
Protein sequence
MLRLLFRGVA VVRRDYAGVE ISAGGDSLCI DVLKPACRHV LYTHLHPRHY GGAGGLAPPA 
VKPGDRLELG PFAVSVVEAY NVTKLVGGAP AHPKGTGVGY LVEADGVSLY HPGDTDLIGE
MAKIRADVFL APIGGDGTMT AEEAAEAVKL IRPKIAVPIH FEGARPYIKF RDISQPYTQV
VHLETSPSSF