| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0399 |
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| Symbol | |
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| ID | 6164848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 361017 |
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| End bp | 362231 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641667557 |
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| Product | hydrogenase formation HypD protein |
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| Protein accession | YP_001793793 |
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| Protein GI | 171184874 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.268739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.656819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGTA AGGAGATGGC CGCCCTTGAG CTGGCCTTTA GGCGGAAGAG CAAGATCACG
GGCATGCTGG TTCAGTACAT CAGGAAATAC GCCGAGGAGC TCAAGAGGAG GGATGGGGAC
TACGTATACA AGATCATGGA CTTCTGCGGC ACCCACGAGT GGACCATCGT CCACTTCGGC
CTCAGGAGCG TCCTGGAGAT GGCTGGTGTG GACAACGTGG AGCTTGTGGC GGGGCCCGGC
TGCCCCGTCT GCGTCACCCC CTCCTACTAC CTAGAGGAGG CCATCAAGCT GGCCTTTGAG
GGGGTGGTCG TGTATACATA CGGAGACGTC TTCAGGCTCC CGGCCCTCCA GAGGGTGAGG
GGGGCCAGGT CGCTGGCTGA GGCTAAGGCG ATGGGGGCCG ACGTGAGGCT TATACACACC
TTCCTCCACG CGGCTATAGA CGCCAAGAAG CACAACAAGC CCTCCCTCTT CCTGGGCATA
GGCTTTGAGA CGGTGGCGCC TGGCTACTCC GAGGCCATCC TGAGGGGGCT CGTGCCTCCC
AACCTCAAGC TGATGTCTCT GGTCAAGCTG ACGCCTCCCG CCATGTTCTA CGCGCTGGAT
ATGGTAAAGG AGAAGCCCAC CGACTACCCC ATCTCCGGCG TCATAGCGCC GGGCCACGTG
TCTACGATCG TCGGGGGGAA GGCGTGGGCC CCGGTGGCTG AGCAGTACCG CATCCCGGTT
GTCGTCTCGG GCTTTGAGCC AAACGACGTC TTGACGGCGG TTGCGGAGAT ACTGAAGCAG
ATAAAAAACG GGGAGCACAA GGTGGTGATC GAATACACGA GGGCTGTCAA GTGGGAGGGC
GACCTCAAGG CCCAGTCCTC CATCAACACC GTGTTTGAGA CCGTGGATAC GGCGTGGCGC
GGCATCGGCT ACATCCCCAA GAGCGGCCTC GCGCTGAGGG AGCAGTTTAA GCAGTACGAC
GCCTTCGCAC ACTTCGGAAT TCCGGATCTA ACGCCGGAGA GGTGGCGGTA CGATCTGCCG
CCCGGCTGTA AATGCGCCGA GGTCAACCTA GGCAAGGCCA AGCCCACCGA CTGCCCCCTC
TTCATGAAGG CGTGTACGCC CGACCACCCC GTCGGCCCCT GTATGGTGTC TGTGGAGGGG
ACGTGCGCCA TCTGGGCGAG GTTCGGCGGC GGGGGGCTTG CGCTGGAGGT GGCGAAGGAG
GTTGGGCTGG CTTAG
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| Protein sequence | MMRKEMAALE LAFRRKSKIT GMLVQYIRKY AEELKRRDGD YVYKIMDFCG THEWTIVHFG
LRSVLEMAGV DNVELVAGPG CPVCVTPSYY LEEAIKLAFE GVVVYTYGDV FRLPALQRVR
GARSLAEAKA MGADVRLIHT FLHAAIDAKK HNKPSLFLGI GFETVAPGYS EAILRGLVPP
NLKLMSLVKL TPPAMFYALD MVKEKPTDYP ISGVIAPGHV STIVGGKAWA PVAEQYRIPV
VVSGFEPNDV LTAVAEILKQ IKNGEHKVVI EYTRAVKWEG DLKAQSSINT VFETVDTAWR
GIGYIPKSGL ALREQFKQYD AFAHFGIPDL TPERWRYDLP PGCKCAEVNL GKAKPTDCPL
FMKACTPDHP VGPCMVSVEG TCAIWARFGG GGLALEVAKE VGLA
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