| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0391 |
|---|
| Symbol | |
|---|
| ID | 6164910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | + |
|---|
| Start bp | 355315 |
|---|
| End bp | 355923 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641667549 |
|---|
| Product | cobalamin (vitamin B12) biosynthesis CbiM protein |
|---|
| Protein accession | YP_001793785 |
|---|
| Protein GI | 171184866 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.026574 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATATAC CGGATGGGTA TCTAGACCCC ATCTCGGCCG GCGTGACCTG GGCGATAATG
TTAATCTACG GCTTTTTTGC GTATAGGAAG GCGGCGCTTG GGAAAAACCT GGAGGTTGTG
GTTGGGCTAG CCGCCGCGAT TTTTATAGCG CAGATGTTTA ACTGGCCTAT CCCCGGCGGG
ACCTCTCTCC ATCTCGTCGG CGGGGCGCTC GCCGCTATTA TGTTGGGGCC CTTCGAGGCG
TTTTTCGTGT TGCTCCTCGT CCTCCTCGCG CAGACGTTGG TTTTCCACGA CGGGGGGATC
ACAACGCTTG GGGCCAACGT GATAAACATG GGCGTGGTCG CGCCGCTTGT GGGCTGGGCG
GCGTGGAGGC TACTCTCCAG ATACAACAAG CCGCTTGCGG CGGCTGTGGC TGGGTGGGCT
AGCATCACCG TGGCGGGGAT GGCGGCGGGG TTTGAGATCG GTGTGAGCCC CTACTTCCCC
TACGCCTGGA CAATCAGCGT GCCTGTGATG ACCACGTGGC ACGCGCTGTT GGGCATAGTA
GAGGGGGTTA TAACGGCGGC CGTGGTGGAG TACCTGCTCA GGAGGGCTCC CCAGTACGTG
AGGGTATGA
|
|---|
| Protein sequence | MHIPDGYLDP ISAGVTWAIM LIYGFFAYRK AALGKNLEVV VGLAAAIFIA QMFNWPIPGG
TSLHLVGGAL AAIMLGPFEA FFVLLLVLLA QTLVFHDGGI TTLGANVINM GVVAPLVGWA
AWRLLSRYNK PLAAAVAGWA SITVAGMAAG FEIGVSPYFP YAWTISVPVM TTWHALLGIV
EGVITAAVVE YLLRRAPQYV RV
|
|---|
| |