Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_0388 |
Symbol | |
ID | 6165093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 352309 |
End bp | 353499 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641667546 |
Product | periplasmic binding protein |
Protein accession | YP_001793782 |
Protein GI | 171184863 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGAAAG CCATCTATCT GGGAATCGCC GCACTCATAA TCCTAGCTCT TTTAGCCTAC TATCTCTCCC AACAGCCGGG GGCGCCGACC GCCGCTCCCC CGGCTCAAAC CACGGCCCCT CCACCCGCCG CGACTGGCGT TTCAACGGCT ACGCCGCCTC CCACCGCCCG TGCTGTGGAG GTGGTGGATG TGTTGGGGCG GCGGGTGTCT GTGAAGGCGC CTGTGTCTAG AGTTGTGGCT TTGGGGCCGG GGGCGCTTAG GCTCGTGGTA TATCTCAACG CCACAGACAA ACTAGCCGGG ATAGAAGAGA TAGAGAAGAG GCCACCGCGG GGTAGAGACT ACGGCTACAT CCTCTGGGCA AAAAACCTCA CCTCGCTCCC GGTGATCGGC CAGGGCGGCC CCGACAGCCC CGTCAACTTT GAGGCTGTTA TGAAGGTGGG CCCCGACGTA ATCGTTATGT CTCCGGTGCT GGCCAACTCC CCCGACCAAG TACAGGAGAA AACCGGCATA CCCGTGGTGG TGGTCTCGTA CAGCAACGCC GTGGGCGGGG TAAACTTCAC CACTCTCTTC CAGTCGCTGA GGACGTTAGG CGTCGTGTTG GGTAGAGAGG AGAGGGCTGA GGAGCTGGTT AGATACATGG AGGATTTGAT CAAGGATCTC AAGAGGCGCA CCGCCAACAT AACCCAAAGG CCGAAGGTGT ACGTAGGCGC AATCTCCTAC AAGGGCGGCC AGCCCTTCGA GAGCACCATG TCGAAGTTCC CGCCGCTGGT CTTGCTAAAC ACGCCGGGCG TCGCAGATAA ATACGGCATA CAGCCGGGGG CCAAGATCGA CTGGGAGGCG CTCTTGAAGG AGCAGCCAGA CGTGATCTTC ATCGACTTGG GGAACTACGC CCTGGTGGCG CAGGACTTTA ACAAGAGCCG GGATAGGTAC TGCTCTCTTA AGGCCTTTAG AGAGGGGAGG GTATACGGGA TACTGCCCTT TAACCACTAC TGGAGCAACA TCGCTACGCT CTTTGCTGAT GCCTACTTTA TGGGTAAGGT GCTTTATCCG GAGGCGTTTA GGGATGTGGA TCCTGTGGCT AAGGCTGACG AGATCTATAG GGAGTTCCTC GGCGCGCCCC TCTACACGGC GGTAGCCAAG GATTTCAAAG GAGGATTTAG ACAGCTGACG GAGTTCAAAT GCGGGTCTTA G
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Protein sequence | MRKAIYLGIA ALIILALLAY YLSQQPGAPT AAPPAQTTAP PPAATGVSTA TPPPTARAVE VVDVLGRRVS VKAPVSRVVA LGPGALRLVV YLNATDKLAG IEEIEKRPPR GRDYGYILWA KNLTSLPVIG QGGPDSPVNF EAVMKVGPDV IVMSPVLANS PDQVQEKTGI PVVVVSYSNA VGGVNFTTLF QSLRTLGVVL GREERAEELV RYMEDLIKDL KRRTANITQR PKVYVGAISY KGGQPFESTM SKFPPLVLLN TPGVADKYGI QPGAKIDWEA LLKEQPDVIF IDLGNYALVA QDFNKSRDRY CSLKAFREGR VYGILPFNHY WSNIATLFAD AYFMGKVLYP EAFRDVDPVA KADEIYREFL GAPLYTAVAK DFKGGFRQLT EFKCGS
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