Gene Tneu_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0388 
Symbol 
ID6165093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp352309 
End bp353499 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content58% 
IMG OID641667546 
Productperiplasmic binding protein 
Protein accessionYP_001793782 
Protein GI171184863 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAAAG CCATCTATCT GGGAATCGCC GCACTCATAA TCCTAGCTCT TTTAGCCTAC 
TATCTCTCCC AACAGCCGGG GGCGCCGACC GCCGCTCCCC CGGCTCAAAC CACGGCCCCT
CCACCCGCCG CGACTGGCGT TTCAACGGCT ACGCCGCCTC CCACCGCCCG TGCTGTGGAG
GTGGTGGATG TGTTGGGGCG GCGGGTGTCT GTGAAGGCGC CTGTGTCTAG AGTTGTGGCT
TTGGGGCCGG GGGCGCTTAG GCTCGTGGTA TATCTCAACG CCACAGACAA ACTAGCCGGG
ATAGAAGAGA TAGAGAAGAG GCCACCGCGG GGTAGAGACT ACGGCTACAT CCTCTGGGCA
AAAAACCTCA CCTCGCTCCC GGTGATCGGC CAGGGCGGCC CCGACAGCCC CGTCAACTTT
GAGGCTGTTA TGAAGGTGGG CCCCGACGTA ATCGTTATGT CTCCGGTGCT GGCCAACTCC
CCCGACCAAG TACAGGAGAA AACCGGCATA CCCGTGGTGG TGGTCTCGTA CAGCAACGCC
GTGGGCGGGG TAAACTTCAC CACTCTCTTC CAGTCGCTGA GGACGTTAGG CGTCGTGTTG
GGTAGAGAGG AGAGGGCTGA GGAGCTGGTT AGATACATGG AGGATTTGAT CAAGGATCTC
AAGAGGCGCA CCGCCAACAT AACCCAAAGG CCGAAGGTGT ACGTAGGCGC AATCTCCTAC
AAGGGCGGCC AGCCCTTCGA GAGCACCATG TCGAAGTTCC CGCCGCTGGT CTTGCTAAAC
ACGCCGGGCG TCGCAGATAA ATACGGCATA CAGCCGGGGG CCAAGATCGA CTGGGAGGCG
CTCTTGAAGG AGCAGCCAGA CGTGATCTTC ATCGACTTGG GGAACTACGC CCTGGTGGCG
CAGGACTTTA ACAAGAGCCG GGATAGGTAC TGCTCTCTTA AGGCCTTTAG AGAGGGGAGG
GTATACGGGA TACTGCCCTT TAACCACTAC TGGAGCAACA TCGCTACGCT CTTTGCTGAT
GCCTACTTTA TGGGTAAGGT GCTTTATCCG GAGGCGTTTA GGGATGTGGA TCCTGTGGCT
AAGGCTGACG AGATCTATAG GGAGTTCCTC GGCGCGCCCC TCTACACGGC GGTAGCCAAG
GATTTCAAAG GAGGATTTAG ACAGCTGACG GAGTTCAAAT GCGGGTCTTA G
 
Protein sequence
MRKAIYLGIA ALIILALLAY YLSQQPGAPT AAPPAQTTAP PPAATGVSTA TPPPTARAVE 
VVDVLGRRVS VKAPVSRVVA LGPGALRLVV YLNATDKLAG IEEIEKRPPR GRDYGYILWA
KNLTSLPVIG QGGPDSPVNF EAVMKVGPDV IVMSPVLANS PDQVQEKTGI PVVVVSYSNA
VGGVNFTTLF QSLRTLGVVL GREERAEELV RYMEDLIKDL KRRTANITQR PKVYVGAISY
KGGQPFESTM SKFPPLVLLN TPGVADKYGI QPGAKIDWEA LLKEQPDVIF IDLGNYALVA
QDFNKSRDRY CSLKAFREGR VYGILPFNHY WSNIATLFAD AYFMGKVLYP EAFRDVDPVA
KADEIYREFL GAPLYTAVAK DFKGGFRQLT EFKCGS