| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0372 |
|---|
| Symbol | |
|---|
| ID | 6165161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 325869 |
|---|
| End bp | 326909 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641667532 |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | YP_001793768 |
|---|
| Protein GI | 171184849 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.314263 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.28598 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGGTGA GGTATCTCGT CTACGGGCTA CCCCTGGCGG TGTTTCTTGT GAGTATCTCG
GTGGGCGCGT ACCCCATACC TATATACGAC GTGGTTATGG TGGTGTCGGC TAAGTTGGCT
TCTCTTTTCT CCACCGCCGT CAGCGTGGTT ACATTTGGCG TCGTTTCGCC TGCGGTGAAT
CTGCACTACC CCACGACCTA TGAGGTTGTT ATCGTTGGAA TTAGGATGCC GAGGGTTGTC
TTCTCTATGG CGGTGGGCGC GGCGTTGGCT CTCTCCGGCT TGATTCTTCA AGCCATGTTT
AAAAACCCGC TTGTCGATAG CTACATCTTG GGCATCTCCT CCGGGGCGGC CTTCGGGGCC
ACGTTGGCTA TAGGCTTCTT GGCTGTCGCC AGCGTGACTC CCATAGCGTT TGTCTTTGCC
TTGTTGGCCG TCTTCATGAC CTACAGCCTG GCGAGGATTG GAGGCTCCGT CACCCCCGTC
TCTCTCGTCT TAGCCGGCAT TATCGTCAAC GCGCTTTTCA CGGCGTTGAC GTCTCTCCTC
AAGTTTCTGA TGGAGCATAA CAGACTCGCG GCGGCTGTGT ATTGGCTAAT GGGTAGCTTC
TCGGGGGTGG GCTGGGACGC CGTCGTTGTC GCCGTTCCCG TAATCTCAGC GCTGGGAGCT
CTGGCGTATC TCTTGAGGTG GCGCCTCGAC GTTCTTAGCT TTGGGGAAGA GGCTAAGACC
CTCGGCGTAG ATGTGGAGAA GCTGAAGGCG CTTTTTGTCC TCGTGGCTAC TCTACTCACG
GCGGTTTCTG TGGCTTACAG CGGGATCATC GGCTGGGTTG GGCTCATGGT GCCGCACATA
ATGAGGATGG CCTTTGGGCC AAGCCACAGA GGTCTAGTGC CGCTGACTAT CGCGGGGGGC
GCCGCCTTTA TGGGCGCCGC GGACACCCTA GCGCGGACTG TAGCCACTTT TGAAATCCCC
GTGGGTATTT TAACCACGGT GCTTGGGGTG CCCTTCTTCA TCTACCTCCT GAGGAAGACG
GGCGGCAGGT GGCATGCTTG A
|
|---|
| Protein sequence | MWVRYLVYGL PLAVFLVSIS VGAYPIPIYD VVMVVSAKLA SLFSTAVSVV TFGVVSPAVN
LHYPTTYEVV IVGIRMPRVV FSMAVGAALA LSGLILQAMF KNPLVDSYIL GISSGAAFGA
TLAIGFLAVA SVTPIAFVFA LLAVFMTYSL ARIGGSVTPV SLVLAGIIVN ALFTALTSLL
KFLMEHNRLA AAVYWLMGSF SGVGWDAVVV AVPVISALGA LAYLLRWRLD VLSFGEEAKT
LGVDVEKLKA LFVLVATLLT AVSVAYSGII GWVGLMVPHI MRMAFGPSHR GLVPLTIAGG
AAFMGAADTL ARTVATFEIP VGILTTVLGV PFFIYLLRKT GGRWHA
|
|---|
| |