Gene Tneu_0370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0370 
Symbol 
ID6164952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp324226 
End bp325122 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content59% 
IMG OID641667530 
Productnucleoside recognition domain-containing protein 
Protein accessionYP_001793766 
Protein GI171184847 
COG category[S] Function unknown 
COG ID[COG3366] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.270899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.25136 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAACC CGGCGGCTCT TCTACGCGAG GTCTTGTTCC TCGCGCCTAG CGTAATCGGG 
GGCTCTCTCC TCGCCGCTTT TCTAATGGAG AGGGGCGTGT TGAACAAGTT GAGGCCTCTC
GCGGCGCCTT TTGTAAAACT CAGCGGGCTT GGCCCCGAGG CCGCGGCGGC GTTTATCACT
GCGTTTTTCG ACGTAAGAAG CGCAAACGCT CTTCTAGTCA CGCTACATAG GGAGGGTAGG
CTTAGCCGGA GGGAGATGTA TCTGGCCTCT CTTATGAACG CCTTCCCAGC CGCCGTGAGA
CACTGGGACT CTATGCTTCC ACCTCTTCTA GCTCTCCTCG GGCTCTGGGG CGCTCTCTAC
TTCGCCTGCT TCCTCCTCGT TGGCTTAGCC CAAACGCTCC TCTTCGCGTT GTTATCTAGG
CTTTTAGTCG CGGGGAGCGG CCGCGTGTCC GCCGTCGTAG TGGGGGGAGG CGGGGGGCTT
AACGCGTTAA AGAGGGCGTT GAGGAGGGCT GTTAAGATCC TCGCGACCTC TGCCGCCGCT
TTGGCAGTTG TGGAGCTCGC CGCCTCTCTC GGCCTCTTTG GCGTGTTAAA TAGCTATGTG
AAATCCGCCA TGTCGGCCTT CCCCCTGTCT GCAGAAGAGC TGGGGGTCGC CGTGGCTTCC
ATGGTTAACT ACGCCGCAGG CGCCGCCGCT GCAGCTGCGT TGATCAACGC GGGGCTGTTG
GACGGGTGGA GAGCTGTCAA AGCCATGTTG TTGGGATCCG CCTTCTCCTT CGTCACAGCG
CTGAGGGCTA TCTTGCCGTA TTACGTAGGC GTGTTTGGCC CTAGAGATGG GCCCCTCCTG
ATGGCTATCT CCACCTCTGT GAGAACAGCT CTCATCCTTG CCCTGGTATG GATATAG
 
Protein sequence
MINPAALLRE VLFLAPSVIG GSLLAAFLME RGVLNKLRPL AAPFVKLSGL GPEAAAAFIT 
AFFDVRSANA LLVTLHREGR LSRREMYLAS LMNAFPAAVR HWDSMLPPLL ALLGLWGALY
FACFLLVGLA QTLLFALLSR LLVAGSGRVS AVVVGGGGGL NALKRALRRA VKILATSAAA
LAVVELAASL GLFGVLNSYV KSAMSAFPLS AEELGVAVAS MVNYAAGAAA AAALINAGLL
DGWRAVKAML LGSAFSFVTA LRAILPYYVG VFGPRDGPLL MAISTSVRTA LILALVWI