Gene Tneu_0368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0368 
Symbol 
ID6165190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp322581 
End bp323489 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content60% 
IMG OID641667528 
Productnucleoside recognition domain-containing protein 
Protein accessionYP_001793764 
Protein GI171184845 
COG category[S] Function unknown 
COG ID[COG3366] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0980587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.268222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGTGC AGGAGGTAGC GGGGGTTCTC CTGGCTATGT TGTTGGGCTT TCTAGCGGCG 
GAGGTGCTTC TGGAATACGG CGTTTTGTAC AAGCTGTCGT TTCTCCGCCG CGTGGCGAGG
TTGGCCAACC TCCCCGACGT CTGCGGCGTT ACCTTCGCCA CGGCGTTTGT GTCGCCTGCC
GCGTCTAACG CCATGTTGCA AAGCCTAAGA GATAGGGGCG TGTTAAACGA TAGGGAGGTG
CTTCTCGCGT CTTTGTTAAA CGCCGCCGCG GTGCCGTTTT ACGAGACCTT CACGGTGTAT
CTGCCCGTGG TGATACCGCT GTTAGGCCCT AGGCTAGGTC TCATGTATAT GTCGGCGATG
TGGCTCAATG GAGCGTTGTC TTTCGCCGTA GTTGTGGCGG CCGGGAGACT GGCGCTGAAT
CGGAGAGAGA CAGGCCTTGT GGAGGAGATG GCGAGGAAGC CTGGTAGGAA CTACAAGGCG
GCGTTGAGAA GGGGGCTGAG GAGGTTTGTG AAAACCGCCG TGGTTTTCGC CGCCACCGTC
ACCACGGTGG AGCTTCTCCT GAGATACGGG GTTCTGCAAC ATCTCGCAAC CCCTCTCTCC
TCCTATGCGA TGGGCATTTC TCCACAGCTA CTACCTGCCG TTGGAATATA CGTGCTTCAC
CCCACCGCGG GCATGGCGGC CGTGGGCCAG CTGGTGAAAA CCGGCGTGGT GGGAGAGGTC
GAGGCGCTGG CGGCGCTACT GCTCGCAAGC GTCTTCATGC TACCGCTACT CTACCTAAGG
GTGTACATCC CCCAGTGGGT CGCCATATTT GGCCCGCGGG TGGGGCTAGC CAGAGGAGCC
ATCGGGCTCT CTATCGCGTT GGCGGCACGC ATAATAGTAC TGGCCTCGGT TCTGGCTCTC
GTGCATTAA
 
Protein sequence
MVVQEVAGVL LAMLLGFLAA EVLLEYGVLY KLSFLRRVAR LANLPDVCGV TFATAFVSPA 
ASNAMLQSLR DRGVLNDREV LLASLLNAAA VPFYETFTVY LPVVIPLLGP RLGLMYMSAM
WLNGALSFAV VVAAGRLALN RRETGLVEEM ARKPGRNYKA ALRRGLRRFV KTAVVFAATV
TTVELLLRYG VLQHLATPLS SYAMGISPQL LPAVGIYVLH PTAGMAAVGQ LVKTGVVGEV
EALAALLLAS VFMLPLLYLR VYIPQWVAIF GPRVGLARGA IGLSIALAAR IIVLASVLAL
VH