Gene Tneu_0354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0354 
Symbol 
ID6166314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp308996 
End bp309661 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content47% 
IMG OID641667514 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001793750 
Protein GI171184831 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.386298 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGGC TAGTCCTCCT CTGGGATCGC TCAAGATGTG TAGCTTGTGG CGCTTGTGTT 
GTAGCATGTA ACGCCGCTAA TTATAATAGT AGTGGCGAAA TGAATAAAAT GTGGGGGTGG
CTTAAAAGCA ATATTAAAAT GGTCGAAGTT AAATCAGGGC CTAAACCAAC GTTATATCTT
GTCTATTGTC AACACTGCGA TAAGCCGTAT TGCGTTGCAA CATGTCCTAC AAATGCTCTG
TATAAAGATA GAGATGGCTT AGTAAAACTA CGGGAGAGCT CTTGTATAGG CTGTAAATAC
TGTTTAGCCG CTTGTCCATA TGGAGCGGTG TGGTGGGATG AGAAAAATAA CAAACCTGCG
AAGTGTGTGG GGTCTGAATG TTTAAGAAGA GTATCAGAGG GGTTAAGACC TGTATGTGCA
GAGGTCTGTC CCTCCGGCGC GTTGGTATTT GGAGATATAG AGAGTCCCTC TAGTGAGGTA
TCACAGAGAT TTACTAAGGG AGAATACATT AAGCCGCCAG AAGACGAGGG GACAAAAGCC
GTTATAGAGA CGAGAAGTAC GTTAAAATCA TTAACTACAG CAGGAGGCGC GGCGCTCGCT
GGCGCCCTCG CCGTGTTGGG CTTAGCCGCC TGGCGGCGGG AGAGAGTACA GGAGAAAAAA
CAATAG
 
Protein sequence
MTRLVLLWDR SRCVACGACV VACNAANYNS SGEMNKMWGW LKSNIKMVEV KSGPKPTLYL 
VYCQHCDKPY CVATCPTNAL YKDRDGLVKL RESSCIGCKY CLAACPYGAV WWDEKNNKPA
KCVGSECLRR VSEGLRPVCA EVCPSGALVF GDIESPSSEV SQRFTKGEYI KPPEDEGTKA
VIETRSTLKS LTTAGGAALA GALAVLGLAA WRRERVQEKK Q