Gene Tneu_0341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0341 
Symbol 
ID6165233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp295902 
End bp297317 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content49% 
IMG OID641667501 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001793737 
Protein GI171184818 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00798095 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCATGCGG CAGAGTTCAA GCTGGGAGAT ACCTCAGCTA TCAAGCCTCT TAAAGCCCCG 
GAGTCTTTAG TTAAGAAGCT CCACGAACGC ATCGGGCTTA AAATCCCTGA GGATAAGCAC
ACATACTTCC TGAGTAGACT TAGGGAGGAG TATAGGAAGA ATAGAAATAT CAAAATCGCC
GTAGATACAT GTGTACACTG CGGCGCATGT ATAGACGCTT GTCCCACCTA TTTAACCACC
AAAGATGTGA AGAACTCGCC TGTGGGACGT GCTGAGCTCA TTAGACGTGT ATTGAAGAAA
GGCTCTGTTA CAGACGCCGA CCTTGAGGAG ATCTACACCT ACTACTGGCA GTGTCTCACT
TGTAGGAGGT GCGGCTATGT CTGTCCCTTC GGCATCGATC AAGCGGATAT CACTAGGTTT
GTCCGTGGCG TGTTGTATGA AATTGGGATG GTAAACAGAT TTGCGGCTAT GACGATAGAC
GCCCACGAGA CTAGCGGCAA TGCTATGAGG ATAACGCCGG CGGCTGCAGT TAATATATTG
AACTACTTCG CAGAAGAGAT AAAGGCCGAG AAAGGCGTCG AGGTTACTTA CTATGTATAC
CGCCACGACC AGAAGAAGAT GATAAAGTTT GTCGGCAAAA ACGCAGTGGG CGAAATACCT
AGAGACAGCC CCGAGTGGCC CGAAGCGATC CTTTTCCCCT CCTCTGCAGA TCTCTTCCTC
AACACAGAGA CTCTCAAAGG CTATCTCACA TTTCTAAACG CTGTAAAAAT AAGATTTGCC
GTCCACACCG GATGTACTGA GGTGGCGAAC TTCGGGCTAT GGACTCACGA GAAACACATG
GAGTACATCG GCAACATATA CTACAACGCC GCGAAAGAGC TCGGAGCAAA ATATGCGATA
TTCGGCGAGT GCGGACACGG CTGGAGGGCG TTTAAAAACG TAGTGGCTCC GAGGCTTGAG
AAGGATGGCA TCAAGGTCTA CCATATACAC CATCTCGTTG TCAAGGCTAT TAAGGAGGGC
AAAATAAAGC TGGATCCTGA GGCCAACGGA GATAAAGTGT ATATGTACCA GGACCCATGT
CAGTATAGCA GAGGCGGCGA CCTCTACGAG GAGCCGCGGT TTATTATAAG CCGCGTAGTA
AAGAGGTGGG TCGAGTGTCC GCAGAACCGC CAGCTCAACT GGTGTTGCGG CGGCCAGGCA
GGCATGCTTG CGGACGAGAT GAAGCCTCTG AGGCTCCAGT ACGGAAGGCT GTGGTACGAG
TGCGTCATTA ACGCAGGCGC ACAACACGTC GTAAGACCGT GTTCGATGTG TAAAGGTACT
TTAAATGGTA TAATTGGCGA TCTTAACAAA ATGTATGGAC GTAATATAAC ATATGGCGGG
CTGATGGATC TAGTATATAG AGCACTTGTA ATTTAG
 
Protein sequence
MHAAEFKLGD TSAIKPLKAP ESLVKKLHER IGLKIPEDKH TYFLSRLREE YRKNRNIKIA 
VDTCVHCGAC IDACPTYLTT KDVKNSPVGR AELIRRVLKK GSVTDADLEE IYTYYWQCLT
CRRCGYVCPF GIDQADITRF VRGVLYEIGM VNRFAAMTID AHETSGNAMR ITPAAAVNIL
NYFAEEIKAE KGVEVTYYVY RHDQKKMIKF VGKNAVGEIP RDSPEWPEAI LFPSSADLFL
NTETLKGYLT FLNAVKIRFA VHTGCTEVAN FGLWTHEKHM EYIGNIYYNA AKELGAKYAI
FGECGHGWRA FKNVVAPRLE KDGIKVYHIH HLVVKAIKEG KIKLDPEANG DKVYMYQDPC
QYSRGGDLYE EPRFIISRVV KRWVECPQNR QLNWCCGGQA GMLADEMKPL RLQYGRLWYE
CVINAGAQHV VRPCSMCKGT LNGIIGDLNK MYGRNITYGG LMDLVYRALV I