| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0320 |
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| Symbol | |
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| ID | 6165361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 276001 |
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| End bp | 277635 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641667481 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_001793717 |
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| Protein GI | 171184798 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.32867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATCCCACTTT TTCTCTATAG CTATGCCGGG GATTATGTAG AAGTTCTAGA CACGACCCTC
CGAGATGGCT CACAAGGCGC AAGCGTCTCC TTCACCCTCC AGGACAAGAT AAGGGTCGCC
CTTAAGCTGG ACGAGCTGGG GGTGGACTAT ATAGAGGGCG GGTGGCCCTA CTCCAACCCC
AAGGACTACG ACTTCTTCAA GGCTATGAGG GAGTACTCCC TCACGCGGGC GAAGCTGGCG
GCCTTCGGGA GCACCAGGCG TAAAAACGTG CGGCCGAAAG ACGACGAGAG CCTCAACTCC
ATCGTTAAGG CCGACGTGCC TGTTGCTGTC ATATTCGGCA AGAGCTGGAC CCTCCACGTG
GAGAAGGTGC TGGAGACCAC CTGGGAGGAG AACCTGTCCA TGATCGCGGA GAGCGTGGAG
TACCTGAGGG AGCACGGCAT GGAGGTGGTG TACGACGCCG AGCACTTCTA CCAGGGGTAC
CAGGAGGACC CCGAGGCCGC CCTCGCCTCC ATAGAGGCGG CGTGGAGAGC CGGCGCCAGG
GTGGTGGTCC TCGCCGACAC AAACGGCGGC ACCCCGCCGC ATGAGGTGTA CAGAATCACT
GCCGAGGTGA GGAGGAGGTT CCCCGCCATG GCGCTGGGCG CCCACATGCA CAACGACATC
GGTTGCGCCG TGGCCAACAC CCTCATGGCC GTGGCCGCCG GCGCTAGACA CGTCCAGGGG
ACCGTCAACG GAGTCGGCGA GCGGACGGGC AACGCCGACC TCACAGCCGT CCTCCCAACG
CTGGAGCTCA AGATGGGGTT TAGGGTTCTG CGGGACGAGC CGCCTCCCGT GAAGTACAGC
CGCCTCAGGG AGGTGTCTAG GCTTGTCTAC GAGGCGCTGG GGGCGCAGCC CAACCCCTAC
CAGCCGTACA TAGGCGAGTT CGCCTTTGCC CACAAGGGGG GCGTCCACGC AGACGCCGTC
ATGAAGGTGC CGAGGGCGTA TGAACACATA GACCCGGCGC TGGTGGGCAA CAGGAGGGTA
TTCGTGGTGT CCGAGGTGGC CGGGGGCGCG AGCGTGGTGG TGAAGGCTGC CGAGGAGCTG
GGGATCCCCC TGGACAAGCG GCACGACGCT GTGAGGAAGG CGCTGGAAGA GATAAAGAGG
CTGGAGAGGG AGGGCTACTC CTTCGACCTA GCCCCCGCCT CCGCCCTTCT CATACTCATG
AGGCACCTAG GCCTCTACAG GGAGAGGTTC AGGGTTGTGG AGTGGAGGGT GGTGACTGGG
CCGGGCGAGG CGGCCTACGC CATAGTTAAG GTGTGGGTCG ACGGCGAGGA GAGGCTGGAG
GCGGGGGAGG GCGTGGGGCC GGTCCACGCC ATTGACGTAG CCCTGAGGAG GGCCCTCACC
GTGTCCTTCC CAGAGCTAAG GCCGGTGGCC CTAAGGGACT ACAGGGTGGT CCTCCCCAGC
TCGGTGAAGA GCACAGAGAG CATCGTCAGA GTCACCGTGG AGTTCGGCAA CGGCGACAGG
ATATGGCGGA CGGTGGGGGT CTCCAGCAAC ATAGTCATGG CGTCCATAAA GGCCCTCGTA
GACGGCTACG ACTTCGCCCT CCAGACAAAA GAATTAAAGA CACGCGCGGT GGAGAACACG
TGGAGGAGGC CCTAA
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| Protein sequence | MPLFLYSYAG DYVEVLDTTL RDGSQGASVS FTLQDKIRVA LKLDELGVDY IEGGWPYSNP
KDYDFFKAMR EYSLTRAKLA AFGSTRRKNV RPKDDESLNS IVKADVPVAV IFGKSWTLHV
EKVLETTWEE NLSMIAESVE YLREHGMEVV YDAEHFYQGY QEDPEAALAS IEAAWRAGAR
VVVLADTNGG TPPHEVYRIT AEVRRRFPAM ALGAHMHNDI GCAVANTLMA VAAGARHVQG
TVNGVGERTG NADLTAVLPT LELKMGFRVL RDEPPPVKYS RLREVSRLVY EALGAQPNPY
QPYIGEFAFA HKGGVHADAV MKVPRAYEHI DPALVGNRRV FVVSEVAGGA SVVVKAAEEL
GIPLDKRHDA VRKALEEIKR LEREGYSFDL APASALLILM RHLGLYRERF RVVEWRVVTG
PGEAAYAIVK VWVDGEERLE AGEGVGPVHA IDVALRRALT VSFPELRPVA LRDYRVVLPS
SVKSTESIVR VTVEFGNGDR IWRTVGVSSN IVMASIKALV DGYDFALQTK ELKTRAVENT
WRRP
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