Gene Tneu_0243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0243 
Symbol 
ID6166072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp215187 
End bp216338 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content58% 
IMG OID641667406 
Productcystathionine gamma-synthase 
Protein accessionYP_001793642 
Protein GI171184723 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.814419 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAGGG GGACGGCCGC CGTGAGGGGG TTCAGGCTTC TTGACCCCTA CGGCTCGCTC 
CAGCCCCCCA TTTATCAGAC GGCGTTGTTT AGGATGGAGG GGGAGGCGCT GAAGTCCGAC
AGGGGGTTCG ACCTCAAGTA TAGTAGGGAG GAGAACCCCA CCCTCAGGCC GCTGGAGGAG
GCGCTGGCTA CGCTCGAGGA CGGCGTGGAC GCCCTCGTGT TTAACAGCGG TATGGCGGCT
CTCTCCTCGG TCTTCTTCTC TCTTCTAAAC GCAGACGCCA CCGTCCTCAC CACCATGGAG
GCATATGGAA CTACCCTTAG GCTTTTGAGC TCGCTTGGTA GATTTGGCGT AAAGCTACGA
AAGACGTATC CAAGTACGGA GACGTATATA GAGGGGCTGA AAAGCGGGAG GCCTACCGTG
GCTTTTGTAG AGACTATAAC TAATCCCCTT CTCCATGTCT TAGATATTCC CGAGGTGGTG
AAGACGGCTA AAGATCTGGG GTCTGTGGTT GTGGTGGATA ACACCTTCGC CACGCCTGTC
CTCATCCAGC CGATATCCCA CGGCGCCGAT GTGGTGGTGC ACTCAACGTC GAAGTACATA
GCGGGGCACA ACGACGTCAT CGGCGGCGTG GCCGTGGTTT CGTCGAGGGC GATGCTGGAG
GAGCTGTGGG TTTGGAGGGC GATGCTGGGG GGCATAATGC AGCCCTTCGA GGCCTTCCTG
ACGCTTCGGG GTTTGAAGAC GTTGTTTGTG CGATTTGAGT ATCAGTGCAA GTCGGCGAAG
GCCATCGCCG AGTTTCTCGC CGAACACAGC AAGGTCGCCG AGGTCATCTA CCCAGGTCTG
CCCACACATC CAGATCATGG AGTGGCCAAG AAGCTCTTCG GCGATAAGTT CGGCGCAGTT
GTATCCTTTA GGGTTAAGGG CGGGAGAGAC GCCGTGTTTA AGTTCTTCAA ATCTCTCAAG
CTGGTGACGC CTGGGCCGAG CCTAGGCGGG GTGGAAAGCA TCGCCACCTA CCCCGTGGCC
AGCGCGGCCT CGCCTATACC TGAGGAGGAT AGAAAAATAT TGGGCATAAC CGAGGACCTT
GTGAGGCTTT CCGTCGGCCT CGAAGACGTA GACGACTTAA TCGAGGACCT AGACCAGGCC
CTCAACGCGT AA
 
Protein sequence
MRRGTAAVRG FRLLDPYGSL QPPIYQTALF RMEGEALKSD RGFDLKYSRE ENPTLRPLEE 
ALATLEDGVD ALVFNSGMAA LSSVFFSLLN ADATVLTTME AYGTTLRLLS SLGRFGVKLR
KTYPSTETYI EGLKSGRPTV AFVETITNPL LHVLDIPEVV KTAKDLGSVV VVDNTFATPV
LIQPISHGAD VVVHSTSKYI AGHNDVIGGV AVVSSRAMLE ELWVWRAMLG GIMQPFEAFL
TLRGLKTLFV RFEYQCKSAK AIAEFLAEHS KVAEVIYPGL PTHPDHGVAK KLFGDKFGAV
VSFRVKGGRD AVFKFFKSLK LVTPGPSLGG VESIATYPVA SAASPIPEED RKILGITEDL
VRLSVGLEDV DDLIEDLDQA LNA