| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0238 |
|---|
| Symbol | |
|---|
| ID | 6165995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 210258 |
|---|
| End bp | 211463 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641667401 |
|---|
| Product | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase |
|---|
| Protein accession | YP_001793637 |
|---|
| Protein GI | 171184718 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase |
|---|
| TIGRFAM ID | [TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.35781 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.343071 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCTGAGG TAGAGGCAAT AAGGGGGACC TACAGCAACC TCCTAAGAGG CGTCAGAATT
GCTCTGCTGG TATCGTCCGG CGTCTCCCTA TATAAGTCCA TAGACACCGC CCGCCTCCTT
ATTAGACATG GGGCAGACGT ACACGTCTTC ATGACGCCAA AGGCAGCCCG GCTTGTATCC
CCACACCTCT TCTGGTGGGC AACCGGCCGC AGACCCGTTG TGGAGCTGAC GGGAGCTACC
GAACACATAG AGATTTGTAG CAACGCAGAC GTGGTGCTGG CCGCCCCGGC CACAGCCAAC
ACCCTGGTTA AGCTCTCGTT AGGCATAGCG GACAACGCGG CGCTCACCTG CGCCTTGGCC
GCCTCCAGGG CTAGGAAGGT GGTCGTTCCA GCCATGAACA TCGCCATGTG GAACACGCCG
CAAGTGCAGG AGGCCGTTGA AAGGCTTAGA AAACATGCGG TCGTTGTACC GCCGGTTTTT
GAGGAGGGCA AGGCCAAGTA CCCACCTCCA GAGGAGGTGG CGGAGTACGT GATAGACGCC
ACCGCCCCCC AGGACTACGG AGGAGTTAGG GTTTTGGTCA CGGCGGGCCC CACCCACGAG
CACATCGACG ACGTGAAATA CATAACCACC CCCAGCAGCG GCTTGACTGG GTACTACTTC
GCAAGGGAGG CGGCGGCCAG GGGGGCGAGG GTAACGCTGG TGGCCGGCCC CGCCGAGCTA
AGGCCGCCCC CAGGTGTGGA GCTGGTCAAG GTCACCTCGG TTCTGGAGAT GTACCGCGCC
GTCTTGGAGA GAGCCGGGGA AAACGACATG TTCATATTCG CGGCCGCCCC CCTCGACTTC
TACGTCGACG GTAGAGCCAG CGGCAAGATC GACAGCTCTC TGCAACAGTA CACCGTTGTG
CTCCGCCAGG CGCCGAAGAT CGCGCAGGAC GTCAAACGGC ACAACCCCCG GGCCTACGTA
ATAGGTTTTA AGGCTGAACA CGGCGTAGAG GAGGCCGAGC TGCTGAGGAA GGCCAGGTCG
AGGATGGAGT CGGGGGGGTG GGACATCGCC CTCGCCCACG ACGTGTCCAA GATGGGCTTC
GGAACTCTAA AGGACGAGTA CCTCCTCCTC ACGAAAGACA GGGTTGAGAA GCTGGGGCCT
GCCCACAAGC GGGAGCTGGC GAGGGCCGTC CTAACGCTAG CTAGGCCCGG GGTTGCCGCG
CGGTAG
|
|---|
| Protein sequence | MSEVEAIRGT YSNLLRGVRI ALLVSSGVSL YKSIDTARLL IRHGADVHVF MTPKAARLVS
PHLFWWATGR RPVVELTGAT EHIEICSNAD VVLAAPATAN TLVKLSLGIA DNAALTCALA
ASRARKVVVP AMNIAMWNTP QVQEAVERLR KHAVVVPPVF EEGKAKYPPP EEVAEYVIDA
TAPQDYGGVR VLVTAGPTHE HIDDVKYITT PSSGLTGYYF AREAAARGAR VTLVAGPAEL
RPPPGVELVK VTSVLEMYRA VLERAGENDM FIFAAAPLDF YVDGRASGKI DSSLQQYTVV
LRQAPKIAQD VKRHNPRAYV IGFKAEHGVE EAELLRKARS RMESGGWDIA LAHDVSKMGF
GTLKDEYLLL TKDRVEKLGP AHKRELARAV LTLARPGVAA R
|
|---|
| |