Gene Tneu_0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0227 
Symbol 
ID6164412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp202136 
End bp203263 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content66% 
IMG OID641667392 
Producthypothetical protein 
Protein accessionYP_001793628 
Protein GI171184709 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2407] L-fucose isomerase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCTATC TCCTGACCTC GGCCGTACAC GGCGCCGACT TCATCGCCGA GGTGGAGAGA 
TACGTCGCAA AGTACATCTC CCTCAAAGAC CCGGCGAGGC CTGAGCCGGA GAGGTTCCCC
GTCATAATCC ACGGCACCGG CGGGACAACC GCCCAGGCGC TGGAGCTCGT GGAGAGGGCT
GGCGCACGCG GCGCCGTTCT AGTGGGCTTC GGCGAACACA ACAGCTTCGC CAGCGCGCTA
CACGCCAAGG CCGAGCTGGA GGCCGCCGGC CGCACGGCCG TCGTCTACCA CTGCCCCACC
TACGCCGAGT GCGGCCCCGC TTTAGCCAAG GCGGCTAGGG TCTCTGCCGC CGCCTCCTCC
CTCATCGGCG CAAAGGCCGT GTTGATCGGT TCCAAGACCA AGCAGGCCGA CTTGGTTAGC
GAGAGGTTCG GATGGTCGGT GGAGGTCGTG CCTCTTGCCG ACTTCGAATC GACCGTCGCG
AACTCGGAGC CCGACAGCGA AGCCCTCTCT TTGTTCGGAG ATGAGAGGGT GGCGAAGGTC
GCCTCTGCCC TCCGCAGGCT GGCAGCGGGG AGCCACCTCG TCGCCATACA GTGCTTCCCC
TTCCTTATGA AGGCCGGATA CACCCCATGT CCAGCGCTCG CGTTGTTAAA CGCCAGGGGC
CTCACGGCGG CGTGCGAGGG GGACCTCTCG GCTGGCTTCG CCATGTTGTT GCTGAGGAGG
CTCGCCGGGG GGAGCAGCTG GATAGCCAAC GTTGTGGAGA GCCGCGGCGA GATGGCCACC
TTCGCCCACT GCACGGTCTC GCTGGACCTA GTGGAGCGGT GGTGGTCCAT GCCCCACTTC
GAGTCGGGCC TGCCCTATGG AATCGCCGGG GAGCTGAGGA GAGGCGTCTA CACGGCCGTG
TCTATCTCGC CGAGGTTTGA AAAGGCGGCT GTGGGCCGGG TATACGTCGA GCGGAGCGGC
AACTACCTAC AGAGCGCATG CCGCACCCAA GCCACGGTTA GGTTCGGGAG GCCGGTCCGC
TTAGAGGAGG AGGCGCCCGC GAACCACCAC GTCTTTGCCC CTGGCGACGT GGCCGCCGAG
GCCGCAGCCG TCTTAAAGCT CCTCTCCTTC TCAACCGTTA TATACTAA
 
Protein sequence
MAYLLTSAVH GADFIAEVER YVAKYISLKD PARPEPERFP VIIHGTGGTT AQALELVERA 
GARGAVLVGF GEHNSFASAL HAKAELEAAG RTAVVYHCPT YAECGPALAK AARVSAAASS
LIGAKAVLIG SKTKQADLVS ERFGWSVEVV PLADFESTVA NSEPDSEALS LFGDERVAKV
ASALRRLAAG SHLVAIQCFP FLMKAGYTPC PALALLNARG LTAACEGDLS AGFAMLLLRR
LAGGSSWIAN VVESRGEMAT FAHCTVSLDL VERWWSMPHF ESGLPYGIAG ELRRGVYTAV
SISPRFEKAA VGRVYVERSG NYLQSACRTQ ATVRFGRPVR LEEEAPANHH VFAPGDVAAE
AAAVLKLLSF STVIY