| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0222 |
|---|
| Symbol | |
|---|
| ID | 6165941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 196484 |
|---|
| End bp | 197545 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641667387 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001793623 |
|---|
| Protein GI | 171184704 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
|---|
| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.255233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGA GGGGGCTTTC CAGGAACGAC GCCGTTTATT TAATGCGTGA GGTTGACCTC
TTCACTCTTG CGGAGGCGGC CCACGCCGTG ACGCAGAAGT TCTATGGCGA CGTCGTGACG
TTTGTCAACA ACGTGGTGAT AAACTATACG AATATCTGCG TCGCCAAGTG CCCCATATGC
GCCTTCTACA GATCCCCGGG CCACCCCGAG GCCTACACCC GTAAGGCTGA GGAGGTGGCG
GCTCTCGTGG AGCGGTTCGC CGTCGAATAC GGCGTTACTG AGCTACACAT CAACGGGGGC
TTCAACCCCC TCCTCCCGCC GGAGTACTTC GACGAGCTGT TCAAGGCCGT TAAACGCCGC
GTGCCCCACG TCGTGGTTAA GGGCCCCACC ATGGCCGAGG CCGCCTACTA CGCCGGGCTG
TGGAAGATGA GCGTGAGGGA GGTGCTCTCC AGGTGGAAAG AGGCGGGCCT CGACGCCATC
TCGGGAGGCG GCGCCGAGAT ATTCGCCGAT GAGGTGAGAA AAGTAGTGGC TCCCCACAAG
ATCTCCGGCG AGGAGTGGCT CAGGGTAGCT GAGGTGGCCC ACGAGCTGGG CATACCGAGC
AACGCCACAG TTCTCTACGG CCACGTAGAG GCAGTGGAGC ATCTGGTAGA CCACATCTTC
AGGGTGAGGG AGCTCCAGGA GAAGACGGGG GGCCTCCTCC TCTTTATACC CGTCAAGTTC
AACCCCCTAA ATACGGAGCT CCACAGAAGG GGGGTGGTAA AGGCCCCAGC GCCCTCCACC
TACGACGTGA AGGTGGTGGC GTTGGCTAGG CTGATCCTGC TGGATAGGCT TAAGGTAGCC
GCCTACTGGC TGTCGGTCGG CAAGAAGCTG GCCTCTACCC TCCTGCTGGC GGGGGCAAAC
GACTTGGTGG GCACCATGTA CAACGAGGCT GTTTTGACGT CGGCTGGGGC AAAACACAGC
GCTACCGTGG AGGAGCTCGC AGCCATCGCC AGGGAGGCCG GGAAGACGCC GGCTCTACGC
GACACCTTCC ACCGCAGGAT AAAGCCCCTA GATGGGCCCT AG
|
|---|
| Protein sequence | MTARGLSRND AVYLMREVDL FTLAEAAHAV TQKFYGDVVT FVNNVVINYT NICVAKCPIC
AFYRSPGHPE AYTRKAEEVA ALVERFAVEY GVTELHINGG FNPLLPPEYF DELFKAVKRR
VPHVVVKGPT MAEAAYYAGL WKMSVREVLS RWKEAGLDAI SGGGAEIFAD EVRKVVAPHK
ISGEEWLRVA EVAHELGIPS NATVLYGHVE AVEHLVDHIF RVRELQEKTG GLLLFIPVKF
NPLNTELHRR GVVKAPAPST YDVKVVALAR LILLDRLKVA AYWLSVGKKL ASTLLLAGAN
DLVGTMYNEA VLTSAGAKHS ATVEELAAIA REAGKTPALR DTFHRRIKPL DGP
|
|---|
| |