Gene Tneu_0187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0187 
Symbol 
ID6165066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp166486 
End bp167232 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content62% 
IMG OID641667352 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_001793589 
Protein GI171184670 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.635564 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCGG TGAAGATACT TGATAGATAC AGTAGACAGA TCGCGGTTAT TGGCGAGGAG 
GGCCAGCGGA AGGTTAGGTC CACCGCCGTC GCCGTTTTTG GGGTCGGGGG GCTGGGAACC
CTCGTCGCGA GGTACGTCGT GGGCGGAGGC TTTAGGAAGG TCTTCCTAGT AGATCACGAC
GTCGTTTCGC CGCCGGATAT CCACAGGCAG ATCCTCTACA CCAGCAGAGA GGTGGGGAGG
CCTAAGGCGG AGGTGGCGGC CGCCGTCTTG AGAGACGTCA ATCCTGAGGT CGAGGTCGTC
CCCATCGCCG AGGCCGTAAG TCCGCAACTT GCCGAGGAGG TACTGGGGGA GGCAGACATA
GCAGTAGATG CGCTAGACAA CTGGGCGTCT AGACACGTGG TTAACGCCGC CTCCGTCAAA
CGGGGGAGGC CTCTTGTCCA CGGCGCCGTG CAGGAGTGGT ACGGCCACGT CACAACGGTG
GTGCCCGGCG CCACGCCCTG TCTTGAGGAC ATCTTCGGGC GGTTTAAGTC GCTCCCCACA
TGCGCCACCG GGTTCTGCCC AGTGCTGGGG CCCGCCGTCG GCGTAATTGC ATCTCTTATG
GCGCTTGAGG TCTTTAACAC CGCCTTGGGC AAGCCGGCGT TGGCGGGCAA ACTGCTGGTG
GTGGATCTGA AACACATGGC GTTTGACGCC ATAGAGCTCC AGCGGAACCC AGCGTGCCCT
GTCTGCGGCG TATCACGCAG GTTTTAA
 
Protein sequence
MSPVKILDRY SRQIAVIGEE GQRKVRSTAV AVFGVGGLGT LVARYVVGGG FRKVFLVDHD 
VVSPPDIHRQ ILYTSREVGR PKAEVAAAVL RDVNPEVEVV PIAEAVSPQL AEEVLGEADI
AVDALDNWAS RHVVNAASVK RGRPLVHGAV QEWYGHVTTV VPGATPCLED IFGRFKSLPT
CATGFCPVLG PAVGVIASLM ALEVFNTALG KPALAGKLLV VDLKHMAFDA IELQRNPACP
VCGVSRRF