| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0139 |
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| Symbol | |
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| ID | 6164664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 127460 |
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| End bp | 128584 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641667305 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001793542 |
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| Protein GI | 171184623 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0201839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAACTA GGAGGAAGCT CCTAGCCGGC GCGGTAGCCG CGGCGGTTGT AGCCGCCTTG
GGAGGTAGCG TTCTGCTTTC GAGGGGGCCG GAGAAGAGGG CGGCAACACT CGGCGGACAG
CTAGCCGTCT ACAACTACTC CTACTACATA GACAAGGACC TGCTCACGGA GTTCGAGAGG
GAGACCGGCG TTAAGGTGAT CTACCAGGAG TTCGAGAGCG GGGAGGAGGC CTACGCCGCC
CTACTCAGAG GCGGGGGCGG GTACGACCTA GTAGTGGTGC CGGATATGTA CCTAAAGGAG
GTGATCAAGG GGGGCTACGT GAGGAAGATG GACCACGGCA GACTAGCCAA CATCAACAAC
ATAGACCAGG CCTTCTTCGA CAACCCGAAC GACCCAGGCC TCCAGCACTC TATTCCATAC
GCCTTCGGCA CCACGGGCTT CGCCGTCAAC TACCACGCGA TGGCCGTAGA GGCCGGCAGA
AAACTCGAGA GCTGGGGCGA CCTCTTCGAC TTCGGTCTCC TGGAGAAGAT GAGAAACAAG
GTGGCTATGT TGGAGGAGTT CGTGGAGCCC GTCATGGCGG CTAAATACGC CCTGGGAATA
GACCCAAACG ACTGGAGCCA AGCGGCTGTG GACAAGGTCG CAGAGCTTCT GAAGAAGCAG
AAGGGCTACA TAAGAGGCTA CATGGGGGTC AGCCAGATCG TTCCGGCTAT AGCCGCCGGC
GAGCTGTGGG TTTCACAGAT CTGGAGCGGA GACGCAGCCA CGGCACGCGA CGAGTTTATC
AAACACGCCG GTGAGAAAAA CGCCGATAAG TTCGAGTACG TGTTGCCAAA GCCAATGACG
CACAGATGGG TCGACTTCAT GGTGATCCCC CGCGACGCGA AAAACATCGA CGCGGCATAC
GCCTTCATTG ACTTCCTGCT TAGGCCTGAG AACTCTGCTA GAATCACCAA GGCGTCTTAC
TACCCAACAG CGCTGAAGAG ACAGCTACTC GAAAAGCACC TCAGCCCCGA CATATTACAG
GACCCCACGG TCTTCCCGCC TGAGGGAGCC AAACTCATCT ATCTCAACTA CACAGACGAG
ATGATTAAGG CCGTGGAGAA GATCAGCTAC GCCGTCAAAG GCTAG
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| Protein sequence | MVTRRKLLAG AVAAAVVAAL GGSVLLSRGP EKRAATLGGQ LAVYNYSYYI DKDLLTEFER
ETGVKVIYQE FESGEEAYAA LLRGGGGYDL VVVPDMYLKE VIKGGYVRKM DHGRLANINN
IDQAFFDNPN DPGLQHSIPY AFGTTGFAVN YHAMAVEAGR KLESWGDLFD FGLLEKMRNK
VAMLEEFVEP VMAAKYALGI DPNDWSQAAV DKVAELLKKQ KGYIRGYMGV SQIVPAIAAG
ELWVSQIWSG DAATARDEFI KHAGEKNADK FEYVLPKPMT HRWVDFMVIP RDAKNIDAAY
AFIDFLLRPE NSARITKASY YPTALKRQLL EKHLSPDILQ DPTVFPPEGA KLIYLNYTDE
MIKAVEKISY AVKG
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