Gene Tneu_0138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0138 
Symbol 
ID6164618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp126811 
End bp127470 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content62% 
IMG OID641667304 
Producthypothetical protein 
Protein accessionYP_001793541 
Protein GI171184622 
COG category[S] Function unknown 
COG ID[COG1628] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0338187 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGGACG CGCCAAGCTG GGCCCCCCTT GTCCGGCCGA GGAGAGGCCC TCCGGCTGAG 
CCTCAACGCC TCCTCCAGAA GAACTTCAAG GTGGTCGCCG TAGCTGAGAG CTTCGTGCTT
CAAGACGGAT ACTCGGTATA CGCCGGCGTG TTGGCCCGTA GAGACGGCGT AGTTGAGGAG
GTGGCGCTGG ATCTGGCCAC ACTCGGCGGC ACAGACGGCA CAGAAGCCGC CTCCAGGATC
CTAGAGGCCC TCCTCCGGCC AGACGTCGCC ATGGTCATGT TAGACGGCTG CGTGGTCTCC
TTCTACAACT GGATAGACGG GGAGGCGCTG TGGAGGAGGT TCGGGAGACC TGTGGCCTGC
TACATCTTCG AAGAGCCGGA GGGGAGGGCG GAGGAGGCCG CGAGAAAGCT GTTTATGGAC
TGGGAGAGGA GGGTCGAGGC GTTTAGGAGG CTGGGCCAGC CGGTTCCCTA CTACACCAGA
GGCGGCTACA GGATATATGT CAGATCTTGG GGGATGGACC CGGCCGACGC GGGGAAGGCG
GCGGAGCTGT GTACAAAGTT CGGCAAGATG CCTGAGCCGA TTCGTGTGGC GAAGATAATA
GCCGGGGGGG CGAGGAAATT TTTAAAAAAC GCCCGCGCGA AGAGCGGCGA TGGTAACTAG
 
Protein sequence
MEDAPSWAPL VRPRRGPPAE PQRLLQKNFK VVAVAESFVL QDGYSVYAGV LARRDGVVEE 
VALDLATLGG TDGTEAASRI LEALLRPDVA MVMLDGCVVS FYNWIDGEAL WRRFGRPVAC
YIFEEPEGRA EEAARKLFMD WERRVEAFRR LGQPVPYYTR GGYRIYVRSW GMDPADAGKA
AELCTKFGKM PEPIRVAKII AGGARKFLKN ARAKSGDGN