| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0136 |
|---|
| Symbol | |
|---|
| ID | 6165595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | + |
|---|
| Start bp | 124995 |
|---|
| End bp | 125792 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641667302 |
|---|
| Product | alpha-L-glutamate ligase |
|---|
| Protein accession | YP_001793539 |
|---|
| Protein GI | 171184620 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
|---|
| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family
[TIGR02144] Lysine biosynthesis enzyme LysX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0680474 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTAGCGC TCGCCTACGA CGTTGTACGA GAGGAGGAGA AGATGTTGCT TAAAGCCGCC
GAGAGAGCCG GCGTACAGCT GAGGCTTGTG AAAGTGGGCG AGGCGGTGGA CATAGAGGGT
TGGGAGCCCG ACGTCTACCT CATCCGCACC CTCAGCCACA ACAGGGGGAT CGTCTTCGCG
GCTGCCGTGG AGGGCAACGG CGGGGTGTCT GTGAACTCCT CGACCGCTAT CGCCGTGAGC
TGGAACAAGG CCGTGTCTCT GGCGAGGCTA AGGGGGGCCG GCCTGCCTGT CCCCAAGACC
ACGGTCCTCT TCGGCGAAGC CGACGTCGAG ATAAAGGGGA GGTCCATAGT GAAGGCGGTG
AGCGGTAGCT GGGGGAGGAA GGTGGCGCTG GTGTCGACGA GGGAGGAGCT CAGCCTCCTG
CTTAAGTCGG CTGAAGGCGA CGTGTTGATG TTGCAGGAGA TGGTGGGGAC AGGCGAGGAC
ATCAGAGTTT TCGTGGTGGG GGGCAGGGCG GTGGCGGCCA TGAGGAGGAT CCCCCCCGAG
GGGGACTGGA GGAGCAACGC CGCCAGGGGG GGCAAAACCC TCCCGCAGAG GGTAGACGGC
GAGTTGGAGG AGCTGGCCGT GAAGGCGGCT GAGGCCGTGG GCGCCCTCTA CGCCGGCGTA
GATATCCTAA TTGGGGAGAG GCTATACGTC AACGAGGTAA ACGGAATACC CGAGTTCAAG
GCGTTGACCA GAACCACCGG GGTGGACGTG GCAAGCCACA TAATACAGAT GCTTCTCGAG
GTCAAGAAAA GAGGGTGA
|
|---|
| Protein sequence | MVALAYDVVR EEEKMLLKAA ERAGVQLRLV KVGEAVDIEG WEPDVYLIRT LSHNRGIVFA
AAVEGNGGVS VNSSTAIAVS WNKAVSLARL RGAGLPVPKT TVLFGEADVE IKGRSIVKAV
SGSWGRKVAL VSTREELSLL LKSAEGDVLM LQEMVGTGED IRVFVVGGRA VAAMRRIPPE
GDWRSNAARG GKTLPQRVDG ELEELAVKAA EAVGALYAGV DILIGERLYV NEVNGIPEFK
ALTRTTGVDV ASHIIQMLLE VKKRG
|
|---|
| |